RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
SUSD3-204ENST00000471462 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
SUSD3-204ENST00000471462 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
SUSD3-204ENST00000471462 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 FYB1O15117 783 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 GNPATO15228 680 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 CAPN15O75808 1086 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 FSTL1Q12841 308 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 ITPK1Q13572 414 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 ITGB4P16144 1822 aa13.24□□□□□ -0.29
SUSD3-204ENST00000471462 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
SUSD3-204ENST00000471462 PRELPP51888 382 aa13.23□□□□□ -0.29
SUSD3-204ENST00000471462 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
SUSD3-204ENST00000471462 TESK2Q96S53 571 aa13.23□□□□□ -0.29
SUSD3-204ENST00000471462 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
SUSD3-204ENST00000471462 DPEP1P16444 411 aa13.22□□□□□ -0.29
SUSD3-204ENST00000471462 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
SUSD3-204ENST00000471462 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
SUSD3-204ENST00000471462 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
SUSD3-204ENST00000471462 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
SUSD3-204ENST00000471462 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
SUSD3-204ENST00000471462 FCHSD2O94868 740 aa13.21□□□□□ -0.29
SUSD3-204ENST00000471462 KCNA3P22001 575 aa13.21□□□□□ -0.29
SUSD3-204ENST00000471462 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
SUSD3-204ENST00000471462 TMF1P82094 1093 aa13.21□□□□□ -0.29
SUSD3-204ENST00000471462 C16orf71Q8IYS4 520 aaPredicted RBP13.21□□□□□ -0.29
SUSD3-204ENST00000471462 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.3
SUSD3-204ENST00000471462 FLT4P35916 1363 aa13.2□□□□□ -0.3
SUSD3-204ENST00000471462 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
SUSD3-204ENST00000471462 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
SUSD3-204ENST00000471462 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
SUSD3-204ENST00000471462 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
SUSD3-204ENST00000471462 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
SUSD3-204ENST00000471462 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
SUSD3-204ENST00000471462 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 GYS1P13807 737 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
SUSD3-204ENST00000471462 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
SUSD3-204ENST00000471462 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
SUSD3-204ENST00000471462 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
SUSD3-204ENST00000471462 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
SUSD3-204ENST00000471462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
SUSD3-204ENST00000471462 KDRP35968 1356 aa13.17□□□□□ -0.3
SUSD3-204ENST00000471462 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
SUSD3-204ENST00000471462 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
SUSD3-204ENST00000471462 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
SUSD3-204ENST00000471462 RC3H1Q5TC82 1133 aaKnown RBP13.16□□□□□ -0.3
SUSD3-204ENST00000471462 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
SUSD3-204ENST00000471462 PHKG2P15735 406 aa13.15□□□□□ -0.3
SUSD3-204ENST00000471462 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
SUSD3-204ENST00000471462 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
SUSD3-204ENST00000471462 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
SUSD3-204ENST00000471462 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
SUSD3-204ENST00000471462 ARFGEF1Q9Y6D6 1849 aa13.14□□□□□ -0.31
SUSD3-204ENST00000471462 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
SUSD3-204ENST00000471462 RFC4P35249 363 aa13.14□□□□□ -0.31
SUSD3-204ENST00000471462 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
SUSD3-204ENST00000471462 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
SUSD3-204ENST00000471462 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
SUSD3-204ENST00000471462 HSPA1AP0DMV8 641 aaKnown RBP13.13□□□□□ -0.31
SUSD3-204ENST00000471462 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
SUSD3-204ENST00000471462 EYA1Q99502 592 aa13.13□□□□□ -0.31
SUSD3-204ENST00000471462 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
SUSD3-204ENST00000471462 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
SUSD3-204ENST00000471462 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
SUSD3-204ENST00000471462 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
SUSD3-204ENST00000471462 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
SUSD3-204ENST00000471462 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
SUSD3-204ENST00000471462 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
SUSD3-204ENST00000471462 CHRNA5P30532 468 aa13.1□□□□□ -0.31
SUSD3-204ENST00000471462 DDR1Q08345 913 aa13.1□□□□□ -0.31
SUSD3-204ENST00000471462 CARD14Q9BXL6 1004 aa13.1□□□□□ -0.31
SUSD3-204ENST00000471462 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
SUSD3-204ENST00000471462 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
SUSD3-204ENST00000471462 KDM6AO15550 1401 aaPredicted RBP13.09□□□□□ -0.31
SUSD3-204ENST00000471462 FKBP8Q14318 412 aa13.09□□□□□ -0.31
SUSD3-204ENST00000471462 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
SUSD3-204ENST00000471462 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
SUSD3-204ENST00000471462 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
SUSD3-204ENST00000471462 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
SUSD3-204ENST00000471462 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
SUSD3-204ENST00000471462 SBF1O95248 1867 aa13.08□□□□□ -0.32
SUSD3-204ENST00000471462 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
SUSD3-204ENST00000471462 TM4SF1P30408 202 aa13.07□□□□□ -0.32
SUSD3-204ENST00000471462 RASSF7Q02833 373 aa13.07□□□□□ -0.32
SUSD3-204ENST00000471462 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
SUSD3-204ENST00000471462 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
SUSD3-204ENST00000471462 LMNB1P20700 586 aa13.06□□□□□ -0.32
SUSD3-204ENST00000471462 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
SUSD3-204ENST00000471462 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
SUSD3-204ENST00000471462 POTECB2RU33 542 aa13.05□□□□□ -0.32
SUSD3-204ENST00000471462 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
SUSD3-204ENST00000471462 HSP90AB1P08238 724 aaKnown RBP13.04□□□□□ -0.32
SUSD3-204ENST00000471462 CABP4P57796 275 aa13.04□□□□□ -0.32
SUSD3-204ENST00000471462 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
SUSD3-204ENST00000471462 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
SUSD3-204ENST00000471462 SLC34A2O95436 690 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms