RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 TNNQ9UQP3 1299 aa15.31■□□□□ 0.04
LINC00880-201ENST00000471357 SLIT2O94813 1529 aa15.3■□□□□ 0.04
LINC00880-201ENST00000471357 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
LINC00880-201ENST00000471357 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
LINC00880-201ENST00000471357 SCN11AQ9UI33 1791 aa15.3■□□□□ 0.04
LINC00880-201ENST00000471357 TRIM27P14373 513 aa15.29■□□□□ 0.04
LINC00880-201ENST00000471357 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
LINC00880-201ENST00000471357 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
LINC00880-201ENST00000471357 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
LINC00880-201ENST00000471357 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
LINC00880-201ENST00000471357 RLBP1P12271 317 aa15.29■□□□□ 0.04
LINC00880-201ENST00000471357 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
LINC00880-201ENST00000471357 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
LINC00880-201ENST00000471357 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
LINC00880-201ENST00000471357 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 NRAPQ86VF7 1730 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 NWD2Q9ULI1 1742 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 KCNQ3O43525 872 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 C8orf37Q96NL8 207 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
LINC00880-201ENST00000471357 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
LINC00880-201ENST00000471357 SIPA1L3O60292 1781 aaPredicted RBP15.27■□□□□ 0.03
LINC00880-201ENST00000471357 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.03
LINC00880-201ENST00000471357 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.03
LINC00880-201ENST00000471357 CDCA7Q9BWT1 371 aaPredicted RBP15.27■□□□□ 0.03
LINC00880-201ENST00000471357 HOXB7P09629 217 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 CABP4P57796 275 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 MRC1P22897 1456 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 EXOC5O00471 708 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
LINC00880-201ENST00000471357 SHANK3Q9BYB0 1731 aa15.25■□□□□ 0.03
LINC00880-201ENST00000471357 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
LINC00880-201ENST00000471357 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
LINC00880-201ENST00000471357 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
LINC00880-201ENST00000471357 API5Q9BZZ5 524 aaKnown RBP15.25■□□□□ 0.03
LINC00880-201ENST00000471357 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
LINC00880-201ENST00000471357 LRP6O75581 1613 aa15.24■□□□□ 0.03
LINC00880-201ENST00000471357 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
LINC00880-201ENST00000471357 SLC39A6Q13433 755 aa15.24■□□□□ 0.03
LINC00880-201ENST00000471357 AAMPQ13685 434 aa15.24■□□□□ 0.03
LINC00880-201ENST00000471357 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
LINC00880-201ENST00000471357 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
LINC00880-201ENST00000471357 BCL9LQ86UU0 1499 aa15.23■□□□□ 0.03
LINC00880-201ENST00000471357 PTPRCP08575 1304 aa15.23■□□□□ 0.03
LINC00880-201ENST00000471357 GIGYF1O75420 1035 aaPredicted RBP15.22■□□□□ 0.03
LINC00880-201ENST00000471357 VPS72Q15906 364 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 NECTIN2Q92692 538 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
LINC00880-201ENST00000471357 MEX3CQ5U5Q3 659 aaKnown RBP15.22■□□□□ 0.03
LINC00880-201ENST00000471357 ITPRIPQ8IWB1 547 aa15.22■□□□□ 0.03
LINC00880-201ENST00000471357 USP21Q9UK80 565 aa15.21■□□□□ 0.03
LINC00880-201ENST00000471357 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
LINC00880-201ENST00000471357 ABCC4O15439 1325 aa15.21■□□□□ 0.02
LINC00880-201ENST00000471357 DDB1Q16531 1140 aa15.21■□□□□ 0.02
LINC00880-201ENST00000471357 TNS2Q63HR2 1409 aa15.2■□□□□ 0.02
LINC00880-201ENST00000471357 G2E3Q7L622 706 aa15.2■□□□□ 0.02
LINC00880-201ENST00000471357 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
LINC00880-201ENST00000471357 ZNF496Q96IT1 587 aaPredicted RBP15.19■□□□□ 0.02
LINC00880-201ENST00000471357 FMNL2Q96PY5 1086 aa15.19■□□□□ 0.02
LINC00880-201ENST00000471357 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
LINC00880-201ENST00000471357 FLIIQ13045 1269 aa15.18■□□□□ 0.02
LINC00880-201ENST00000471357 TMOD3Q9NYL9 352 aa15.18■□□□□ 0.02
LINC00880-201ENST00000471357 PRAMEF22A3QJZ6 481 aa15.17■□□□□ 0.02
LINC00880-201ENST00000471357 CHMP4BQ9H444 224 aaKnown RBP15.17■□□□□ 0.02
LINC00880-201ENST00000471357 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
LINC00880-201ENST00000471357 RGS12O14924 1447 aa15.17■□□□□ 0.02
LINC00880-201ENST00000471357 SNRPA1P09661 255 aaKnown RBP15.17■□□□□ 0.02
LINC00880-201ENST00000471357 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
LINC00880-201ENST00000471357 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
LINC00880-201ENST00000471357 FAM98CQ17RN3 349 aaKnown RBP15.16■□□□□ 0.02
LINC00880-201ENST00000471357 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
LINC00880-201ENST00000471357 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
LINC00880-201ENST00000471357 PHAXQ9H814 394 aaKnown RBP15.16■□□□□ 0.02
LINC00880-201ENST00000471357 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.15■□□□□ 0.02
LINC00880-201ENST00000471357 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
LINC00880-201ENST00000471357 PIGBQ92521 554 aa15.15■□□□□ 0.02
LINC00880-201ENST00000471357 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
LINC00880-201ENST00000471357 AFF2P51816 1311 aa15.15■□□□□ 0.02
LINC00880-201ENST00000471357 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
LINC00880-201ENST00000471357 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
LINC00880-201ENST00000471357 PCDHB15Q9Y5E8 787 aa15.14■□□□□ 0.01
LINC00880-201ENST00000471357 KDM2BQ8NHM5 1336 aa15.13■□□□□ 0.01
LINC00880-201ENST00000471357 F6X3S4 739 aa15.13■□□□□ 0.01
LINC00880-201ENST00000471357 ANXA1P04083 346 aa15.13■□□□□ 0.01
LINC00880-201ENST00000471357 DDX21Q9NR30 783 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00880-201ENST00000471357 HYPKQ9NX55 129 aa15.13■□□□□ 0.01
LINC00880-201ENST00000471357 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
LINC00880-201ENST00000471357 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
LINC00880-201ENST00000471357 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms