RNA–Protein interactions for RNA: ENST00000471212.5

TPM2-205, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 1,363 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-205ENST00000471212 KDRP35968 1356 aa23.14■■□□□ 1.29
TPM2-205ENST00000471212 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.29
TPM2-205ENST00000471212 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
TPM2-205ENST00000471212 ATG3Q9NT62 314 aa23.13■■□□□ 1.29
TPM2-205ENST00000471212 C4BP0C0L5 1744 aa23.12■■□□□ 1.29
TPM2-205ENST00000471212 GNPATO15228 680 aa23.11■■□□□ 1.29
TPM2-205ENST00000471212 MSL1Q68DK7 614 aa23.11■■□□□ 1.29
TPM2-205ENST00000471212 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
TPM2-205ENST00000471212 NFATC2IPQ8NCF5 419 aa23.1■■□□□ 1.29
TPM2-205ENST00000471212 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
TPM2-205ENST00000471212 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
TPM2-205ENST00000471212 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.29
TPM2-205ENST00000471212 LINC00116Q8NCU8 138 aa23.08■■□□□ 1.29
TPM2-205ENST00000471212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
TPM2-205ENST00000471212 SSFA2P28290 1259 aa23.07■■□□□ 1.28
TPM2-205ENST00000471212 SGIP1Q9BQI5 828 aa23.07■■□□□ 1.28
TPM2-205ENST00000471212 GAS2L2Q8NHY3 880 aa23.06■■□□□ 1.28
TPM2-205ENST00000471212 RTCBQ9Y3I0 505 aaKnown RBP23.06■■□□□ 1.28
TPM2-205ENST00000471212 NEFMP07197 916 aa23.05■■□□□ 1.28
TPM2-205ENST00000471212 SCN11AQ9UI33 1791 aa23.05■■□□□ 1.28
TPM2-205ENST00000471212 YY1P25490 414 aa23.04■■□□□ 1.28
TPM2-205ENST00000471212 ITPK1Q13572 414 aa23.04■■□□□ 1.28
TPM2-205ENST00000471212 GPR162Q16538 588 aa23.04■■□□□ 1.28
TPM2-205ENST00000471212 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
TPM2-205ENST00000471212 U2AF1L5P0DN76 240 aaPredicted RBP23.03■■□□□ 1.28
TPM2-205ENST00000471212 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
TPM2-205ENST00000471212 U2AF1Q01081 240 aaKnown RBP eCLIP23.03■■□□□ 1.28
TPM2-205ENST00000471212 TRAPPC3LQ5T215 181 aa23.03■■□□□ 1.28
TPM2-205ENST00000471212 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
TPM2-205ENST00000471212 RNMTO43148 476 aaKnown RBP23.02■■□□□ 1.28
TPM2-205ENST00000471212 UBR3Q6ZT12 1888 aa23.02■■□□□ 1.28
TPM2-205ENST00000471212 TEFQ10587 303 aa23.01■■□□□ 1.27
TPM2-205ENST00000471212 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
TPM2-205ENST00000471212 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
TPM2-205ENST00000471212 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
TPM2-205ENST00000471212 MAP3K5Q99683 1374 aa23■■□□□ 1.27
TPM2-205ENST00000471212 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
TPM2-205ENST00000471212 RFC4P35249 363 aa23■■□□□ 1.27
TPM2-205ENST00000471212 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
TPM2-205ENST00000471212 PRKAR2BP31323 418 aa22.99■■□□□ 1.27
TPM2-205ENST00000471212 RC3H1Q5TC82 1133 aaKnown RBP22.98■■□□□ 1.27
TPM2-205ENST00000471212 SMIM5Q71RC9 77 aa22.98■■□□□ 1.27
TPM2-205ENST00000471212 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
TPM2-205ENST00000471212 ADRA2BP18089 450 aa22.97■■□□□ 1.27
TPM2-205ENST00000471212 CNTNAP4Q9C0A0 1308 aa22.97■■□□□ 1.27
TPM2-205ENST00000471212 ZNF831Q5JPB2 1677 aa22.96■■□□□ 1.27
TPM2-205ENST00000471212 COL24A1Q17RW2 1714 aa22.95■■□□□ 1.26
TPM2-205ENST00000471212 RPS6KA4O75676 772 aa22.94■■□□□ 1.26
TPM2-205ENST00000471212 CRKLP46109 303 aaKnown RBP22.94■■□□□ 1.26
TPM2-205ENST00000471212 SLC39A6Q13433 755 aa22.94■■□□□ 1.26
TPM2-205ENST00000471212 SLC4A9Q96Q91 983 aa22.93■■□□□ 1.26
TPM2-205ENST00000471212 COL5A3P25940 1745 aaPredicted RBP22.93■■□□□ 1.26
TPM2-205ENST00000471212 FCHSD2O94868 740 aa22.92■■□□□ 1.26
TPM2-205ENST00000471212 NPM2Q86SE8 214 aaKnown RBP22.92■■□□□ 1.26
TPM2-205ENST00000471212 AMIGO3Q86WK7 504 aa22.92■■□□□ 1.26
TPM2-205ENST00000471212 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
TPM2-205ENST00000471212 RSPH6AQ9H0K4 717 aa22.92■■□□□ 1.26
TPM2-205ENST00000471212 CD2APQ9Y5K6 639 aa22.92■■□□□ 1.26
TPM2-205ENST00000471212 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
TPM2-205ENST00000471212 NLGN2Q8NFZ4 835 aa22.91■■□□□ 1.26
TPM2-205ENST00000471212 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
TPM2-205ENST00000471212 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
TPM2-205ENST00000471212 MRC1P22897 1456 aa22.91■■□□□ 1.26
TPM2-205ENST00000471212 ZPR1O75312 459 aa22.89■■□□□ 1.26
TPM2-205ENST00000471212 MMP10P09238 476 aa22.89■■□□□ 1.26
TPM2-205ENST00000471212 DNAJC10Q8IXB1 793 aa22.89■■□□□ 1.26
TPM2-205ENST00000471212 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.26
TPM2-205ENST00000471212 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.26
TPM2-205ENST00000471212 STARD3NLO95772 234 aa22.89■■□□□ 1.25
TPM2-205ENST00000471212 RALBP1Q15311 655 aa22.89■■□□□ 1.25
TPM2-205ENST00000471212 MAPK8IP3Q9UPT6 1336 aa22.88■■□□□ 1.25
TPM2-205ENST00000471212 GRIN3BO60391 1043 aa22.88■■□□□ 1.25
TPM2-205ENST00000471212 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
TPM2-205ENST00000471212 CHD4Q14839 1912 aa22.87■■□□□ 1.25
TPM2-205ENST00000471212 BTBD11A6QL63 1104 aa22.87■■□□□ 1.25
TPM2-205ENST00000471212 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
TPM2-205ENST00000471212 VSIG10Q8N0Z9 540 aa22.87■■□□□ 1.25
TPM2-205ENST00000471212 TJP1Q07157 1748 aa22.86■■□□□ 1.25
TPM2-205ENST00000471212 IL17REQ8NFR9 667 aa22.86■■□□□ 1.25
TPM2-205ENST00000471212 MYH14Q7Z406 1995 aaKnown RBP22.85■■□□□ 1.25
TPM2-205ENST00000471212 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
TPM2-205ENST00000471212 TEX13AQ9BXU3 409 aaPredicted RBP22.85■■□□□ 1.25
TPM2-205ENST00000471212 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
TPM2-205ENST00000471212 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
TPM2-205ENST00000471212 ADAMTS7Q9UKP4 1686 aa22.83■■□□□ 1.25
TPM2-205ENST00000471212 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.25
TPM2-205ENST00000471212 CYP19A1P11511 503 aaPredicted RBP22.82■■□□□ 1.24
TPM2-205ENST00000471212 GYS1P13807 737 aa22.82■■□□□ 1.24
TPM2-205ENST00000471212 INTS5Q6P9B9 1019 aaKnown RBP22.81■■□□□ 1.24
TPM2-205ENST00000471212 MCM10Q7L590 875 aa22.81■■□□□ 1.24
TPM2-205ENST00000471212 SRP68Q9UHB9 627 aaKnown RBP22.81■■□□□ 1.24
TPM2-205ENST00000471212 C4AP0C0L4 1744 aa22.81■■□□□ 1.24
TPM2-205ENST00000471212 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
TPM2-205ENST00000471212 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
TPM2-205ENST00000471212 WWC3Q9ULE0 1092 aa22.8■■□□□ 1.24
TPM2-205ENST00000471212 CICQ96RK0 1608 aaPredicted RBP22.8■■□□□ 1.24
TPM2-205ENST00000471212 USP42Q9H9J4 1324 aaKnown RBP22.8■■□□□ 1.24
TPM2-205ENST00000471212 A0A087WZG4 1122 aa22.79■■□□□ 1.24
TPM2-205ENST00000471212 ZNF496Q96IT1 587 aaPredicted RBP22.79■■□□□ 1.24
TPM2-205ENST00000471212 COL15A1P39059 1388 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms