RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
TMEM139-206ENST00000471161 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
TMEM139-206ENST00000471161 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
TMEM139-206ENST00000471161 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
TMEM139-206ENST00000471161 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
TMEM139-206ENST00000471161 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
TMEM139-206ENST00000471161 CACNA1FO60840 1977 aa16.67■□□□□ 0.26
TMEM139-206ENST00000471161 RGS12O14924 1447 aa16.67■□□□□ 0.26
TMEM139-206ENST00000471161 ABCC4O15439 1325 aa16.66■□□□□ 0.26
TMEM139-206ENST00000471161 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
TMEM139-206ENST00000471161 IL2RBP14784 551 aa16.66■□□□□ 0.26
TMEM139-206ENST00000471161 PCDHB15Q9Y5E8 787 aa16.66■□□□□ 0.26
TMEM139-206ENST00000471161 ADAMTS2O95450 1211 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 IGHDP01880 384 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 AAMPQ13685 434 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 G2E3Q7L622 706 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 ZCRB1Q8TBF4 217 aaKnown RBP16.65■□□□□ 0.26
TMEM139-206ENST00000471161 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
TMEM139-206ENST00000471161 USP35Q9P2H5 1018 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
TMEM139-206ENST00000471161 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
TMEM139-206ENST00000471161 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
TMEM139-206ENST00000471161 MRC1P22897 1456 aa16.64■□□□□ 0.25
TMEM139-206ENST00000471161 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
TMEM139-206ENST00000471161 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
TMEM139-206ENST00000471161 NRAPQ86VF7 1730 aa16.64■□□□□ 0.25
TMEM139-206ENST00000471161 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
TMEM139-206ENST00000471161 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
TMEM139-206ENST00000471161 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
TMEM139-206ENST00000471161 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
TMEM139-206ENST00000471161 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
TMEM139-206ENST00000471161 PCDH11XQ9BZA7 1347 aa16.63■□□□□ 0.25
TMEM139-206ENST00000471161 PCDH11YQ9BZA8 1340 aa16.63■□□□□ 0.25
TMEM139-206ENST00000471161 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 PTPRCP08575 1304 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
TMEM139-206ENST00000471161 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
TMEM139-206ENST00000471161 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
TMEM139-206ENST00000471161 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
TMEM139-206ENST00000471161 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
TMEM139-206ENST00000471161 HOXB7P09629 217 aa16.6■□□□□ 0.25
TMEM139-206ENST00000471161 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
TMEM139-206ENST00000471161 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
TMEM139-206ENST00000471161 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
TMEM139-206ENST00000471161 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
TMEM139-206ENST00000471161 C5P01031 1676 aa16.59■□□□□ 0.25
TMEM139-206ENST00000471161 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
TMEM139-206ENST00000471161 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
TMEM139-206ENST00000471161 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
TMEM139-206ENST00000471161 TOGARAM1Q9Y4F4 1720 aa16.58■□□□□ 0.24
TMEM139-206ENST00000471161 FLIIQ13045 1269 aa16.58■□□□□ 0.24
TMEM139-206ENST00000471161 NWD2Q9ULI1 1742 aa16.58■□□□□ 0.24
TMEM139-206ENST00000471161 F6X3S4 739 aa16.57■□□□□ 0.24
TMEM139-206ENST00000471161 CABP4P57796 275 aa16.57■□□□□ 0.24
TMEM139-206ENST00000471161 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
TMEM139-206ENST00000471161 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
TMEM139-206ENST00000471161 SLIT2O94813 1529 aa16.56■□□□□ 0.24
TMEM139-206ENST00000471161 JCADQ9P266 1359 aa16.56■□□□□ 0.24
TMEM139-206ENST00000471161 ANXA1P04083 346 aa16.55■□□□□ 0.24
TMEM139-206ENST00000471161 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
TMEM139-206ENST00000471161 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
TMEM139-206ENST00000471161 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
TMEM139-206ENST00000471161 GLI3P10071 1580 aa16.54■□□□□ 0.24
TMEM139-206ENST00000471161 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
TMEM139-206ENST00000471161 RWDD1Q9H446 243 aaPredicted RBP16.54■□□□□ 0.24
TMEM139-206ENST00000471161 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
TMEM139-206ENST00000471161 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
TMEM139-206ENST00000471161 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
TMEM139-206ENST00000471161 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
TMEM139-206ENST00000471161 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
TMEM139-206ENST00000471161 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
TMEM139-206ENST00000471161 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
TMEM139-206ENST00000471161 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
TMEM139-206ENST00000471161 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
TMEM139-206ENST00000471161 CHMP4AQ9BY43 222 aa16.52■□□□□ 0.24
TMEM139-206ENST00000471161 ITGB4P16144 1822 aa16.52■□□□□ 0.23
TMEM139-206ENST00000471161 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
TMEM139-206ENST00000471161 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
TMEM139-206ENST00000471161 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
TMEM139-206ENST00000471161 LRP6O75581 1613 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
TMEM139-206ENST00000471161 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 MEIS3Q99687 375 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 PDIA6Q15084 440 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 LAMB4A4D0S4 1761 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
TMEM139-206ENST00000471161 TNS2Q63HR2 1409 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 EXOC5O00471 708 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
TMEM139-206ENST00000471161 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms