RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 IL13P35225 146 aa22.97■■□□□ 1.27
C4A-250ENST00000469975 SULT6B1Q6IMI4 303 aa22.97■■□□□ 1.27
C4A-250ENST00000469975 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
C4A-250ENST00000469975 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
C4A-250ENST00000469975 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
C4A-250ENST00000469975 GNPATO15228 680 aa22.95■■□□□ 1.26
C4A-250ENST00000469975 COL5A3P25940 1745 aaPredicted RBP22.95■■□□□ 1.26
C4A-250ENST00000469975 KDRP35968 1356 aa22.95■■□□□ 1.26
C4A-250ENST00000469975 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
C4A-250ENST00000469975 ERVV-2B6SEH9 535 aa22.94■■□□□ 1.26
C4A-250ENST00000469975 YBX3P16989 372 aaKnown RBP eCLIP22.94■■□□□ 1.26
C4A-250ENST00000469975 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
C4A-250ENST00000469975 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
C4A-250ENST00000469975 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
C4A-250ENST00000469975 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
C4A-250ENST00000469975 AMOTQ4VCS5 1084 aa22.93■■□□□ 1.26
C4A-250ENST00000469975 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
C4A-250ENST00000469975 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
C4A-250ENST00000469975 PER1O15534 1290 aaPredicted RBP22.92■■□□□ 1.26
C4A-250ENST00000469975 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
C4A-250ENST00000469975 HMGB2P26583 209 aaKnown RBP22.92■■□□□ 1.26
C4A-250ENST00000469975 SSFA2P28290 1259 aa22.92■■□□□ 1.26
C4A-250ENST00000469975 MTHFSP49914 203 aa22.92■■□□□ 1.26
C4A-250ENST00000469975 CABP4P57796 275 aa22.91■■□□□ 1.26
C4A-250ENST00000469975 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
C4A-250ENST00000469975 MYH14Q7Z406 1995 aaKnown RBP22.9■■□□□ 1.26
C4A-250ENST00000469975 C1orf141Q5JVX7 400 aa22.9■■□□□ 1.26
C4A-250ENST00000469975 HMOX1P09601 288 aa22.88■■□□□ 1.25
C4A-250ENST00000469975 WWC3Q9ULE0 1092 aa22.88■■□□□ 1.25
C4A-250ENST00000469975 TJP1Q07157 1748 aa22.88■■□□□ 1.25
C4A-250ENST00000469975 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
C4A-250ENST00000469975 CD2APQ9Y5K6 639 aa22.87■■□□□ 1.25
C4A-250ENST00000469975 C4AP0C0L4 1744 aa22.86■■□□□ 1.25
C4A-250ENST00000469975 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
C4A-250ENST00000469975 LGR6Q9HBX8 967 aa22.83■■□□□ 1.25
C4A-250ENST00000469975 RTCBQ9Y3I0 505 aaKnown RBP22.83■■□□□ 1.25
C4A-250ENST00000469975 MMP10P09238 476 aa22.82■■□□□ 1.24
C4A-250ENST00000469975 TRAPPC3LQ5T215 181 aa22.82■■□□□ 1.24
C4A-250ENST00000469975 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
C4A-250ENST00000469975 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
C4A-250ENST00000469975 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
C4A-250ENST00000469975 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
C4A-250ENST00000469975 ARHGEF1Q92888 912 aaKnown RBP22.81■■□□□ 1.24
C4A-250ENST00000469975 CICQ96RK0 1608 aaPredicted RBP22.81■■□□□ 1.24
C4A-250ENST00000469975 N4BP2Q86UW6 1770 aaPredicted RBP22.81■■□□□ 1.24
C4A-250ENST00000469975 KIAA1551Q9HCM1 1747 aa22.8■■□□□ 1.24
C4A-250ENST00000469975 GRIN3BO60391 1043 aa22.8■■□□□ 1.24
C4A-250ENST00000469975 RC3H1Q5TC82 1133 aaKnown RBP22.8■■□□□ 1.24
C4A-250ENST00000469975 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
C4A-250ENST00000469975 RPS6KA4O75676 772 aa22.79■■□□□ 1.24
C4A-250ENST00000469975 MTHFSDQ2M296 383 aaKnown RBP22.79■■□□□ 1.24
C4A-250ENST00000469975 MRC1P22897 1456 aa22.78■■□□□ 1.24
C4A-250ENST00000469975 ADAMTS7Q9UKP4 1686 aa22.77■■□□□ 1.24
C4A-250ENST00000469975 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
C4A-250ENST00000469975 CRKLP46109 303 aaKnown RBP22.77■■□□□ 1.24
C4A-250ENST00000469975 SLC39A6Q13433 755 aa22.77■■□□□ 1.24
C4A-250ENST00000469975 SLC52A2Q9HAB3 445 aa22.77■■□□□ 1.24
C4A-250ENST00000469975 GYS1P13807 737 aa22.76■■□□□ 1.23
C4A-250ENST00000469975 RFC4P35249 363 aa22.76■■□□□ 1.23
C4A-250ENST00000469975 NPC1L1Q9UHC9 1359 aa22.76■■□□□ 1.23
C4A-250ENST00000469975 ADRA2BP18089 450 aa22.75■■□□□ 1.23
C4A-250ENST00000469975 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
C4A-250ENST00000469975 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
C4A-250ENST00000469975 KCPQ6ZWJ8 1503 aa22.74■■□□□ 1.23
C4A-250ENST00000469975 U2SURPO15042 1029 aaKnown RBP22.74■■□□□ 1.23
C4A-250ENST00000469975 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
C4A-250ENST00000469975 INTS5Q6P9B9 1019 aaKnown RBP22.73■■□□□ 1.23
C4A-250ENST00000469975 NLGN1Q8N2Q7 840 aa22.73■■□□□ 1.23
C4A-250ENST00000469975 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
C4A-250ENST00000469975 C10orf71Q711Q0 1435 aa22.71■■□□□ 1.23
C4A-250ENST00000469975 ATP10DQ9P241 1426 aa22.71■■□□□ 1.23
C4A-250ENST00000469975 A0A0G2JLW4 131 aa22.7■■□□□ 1.22
C4A-250ENST00000469975 BRCA1P38398 1863 aaKnown RBP22.69■■□□□ 1.22
C4A-250ENST00000469975 SIPA1L3O60292 1781 aaPredicted RBP22.69■■□□□ 1.22
C4A-250ENST00000469975 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
C4A-250ENST00000469975 C1QTNF8P60827 252 aa22.69■■□□□ 1.22
C4A-250ENST00000469975 FKBP8Q14318 412 aa22.69■■□□□ 1.22
C4A-250ENST00000469975 CCDC87Q9NVE4 849 aa22.68■■□□□ 1.22
C4A-250ENST00000469975 PARP3Q9Y6F1 533 aa22.68■■□□□ 1.22
C4A-250ENST00000469975 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
C4A-250ENST00000469975 CYP19A1P11511 503 aaPredicted RBP22.67■■□□□ 1.22
C4A-250ENST00000469975 DDR1Q08345 913 aa22.67■■□□□ 1.22
C4A-250ENST00000469975 DPEP1P16444 411 aa22.66■■□□□ 1.22
C4A-250ENST00000469975 ADCY9O60503 1353 aa22.65■■□□□ 1.22
C4A-250ENST00000469975 SOS1Q07889 1333 aaPredicted RBP22.65■■□□□ 1.22
C4A-250ENST00000469975 IL17REQ8NFR9 667 aa22.65■■□□□ 1.22
C4A-250ENST00000469975 ZNF526Q8TF50 670 aaPredicted RBP22.65■■□□□ 1.22
C4A-250ENST00000469975 TGFB2P61812 414 aa22.64■■□□□ 1.21
C4A-250ENST00000469975 USPL1Q5W0Q7 1092 aa22.64■■□□□ 1.21
C4A-250ENST00000469975 PHACTR3Q96KR7 559 aa22.64■■□□□ 1.21
C4A-250ENST00000469975 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
C4A-250ENST00000469975 ZBTB1Q9Y2K1 713 aa22.64■■□□□ 1.21
C4A-250ENST00000469975 AFDNP55196 1824 aaKnown RBP22.64■■□□□ 1.21
C4A-250ENST00000469975 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
C4A-250ENST00000469975 GNAT3A8MTJ3 354 aa22.62■■□□□ 1.21
C4A-250ENST00000469975 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
C4A-250ENST00000469975 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
C4A-250ENST00000469975 GAS2L2Q8NHY3 880 aa22.61■■□□□ 1.21
C4A-250ENST00000469975 RSPH6AQ9H0K4 717 aa22.61■■□□□ 1.21
C4A-250ENST00000469975 COL15A1P39059 1388 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms