RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
SHROOM3-203ENST00000469923 DIAPH1O60610 1272 aaKnown RBP12.52□□□□□ -0.41
SHROOM3-203ENST00000469923 CABP4P57796 275 aa12.52□□□□□ -0.41
SHROOM3-203ENST00000469923 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
SHROOM3-203ENST00000469923 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
SHROOM3-203ENST00000469923 KCNQ3O43525 872 aa12.51□□□□□ -0.41
SHROOM3-203ENST00000469923 PPP2R1AP30153 589 aa12.51□□□□□ -0.41
SHROOM3-203ENST00000469923 IL17REQ8NFR9 667 aa12.51□□□□□ -0.41
SHROOM3-203ENST00000469923 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
SHROOM3-203ENST00000469923 GNPATO15228 680 aa12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 YBX3P16989 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 AK7Q96M32 723 aa12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 KDRP35968 1356 aa12.5□□□□□ -0.41
SHROOM3-203ENST00000469923 YY1P25490 414 aa12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
SHROOM3-203ENST00000469923 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
SHROOM3-203ENST00000469923 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
SHROOM3-203ENST00000469923 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
SHROOM3-203ENST00000469923 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
SHROOM3-203ENST00000469923 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
SHROOM3-203ENST00000469923 POLD1P28340 1107 aa12.46□□□□□ -0.41
SHROOM3-203ENST00000469923 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
SHROOM3-203ENST00000469923 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
SHROOM3-203ENST00000469923 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.42
SHROOM3-203ENST00000469923 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 GPR162Q16538 588 aa12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
SHROOM3-203ENST00000469923 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 TRAPPC3LQ5T215 181 aa12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 C5P01031 1676 aa12.44□□□□□ -0.42
SHROOM3-203ENST00000469923 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 MMP10P09238 476 aa12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 GYS1P13807 737 aa12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 FKBP8Q14318 412 aa12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 MCM10Q7L590 875 aa12.43□□□□□ -0.42
SHROOM3-203ENST00000469923 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 SSFA2P28290 1259 aa12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
SHROOM3-203ENST00000469923 DDR1Q08345 913 aa12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
SHROOM3-203ENST00000469923 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
SHROOM3-203ENST00000469923 FLAD1Q8NFF5 587 aa12.4□□□□□ -0.42
SHROOM3-203ENST00000469923 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.42
SHROOM3-203ENST00000469923 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
SHROOM3-203ENST00000469923 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 A1BGP04217 495 aa12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 CANXP27824 592 aaKnown RBP12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 USPL1Q5W0Q7 1092 aa12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
SHROOM3-203ENST00000469923 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 KCNA3P22001 575 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 RFC4P35249 363 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
SHROOM3-203ENST00000469923 DPEP1P16444 411 aa12.37□□□□□ -0.43
SHROOM3-203ENST00000469923 TM4SF1P30408 202 aa12.37□□□□□ -0.43
SHROOM3-203ENST00000469923 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
SHROOM3-203ENST00000469923 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
SHROOM3-203ENST00000469923 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
SHROOM3-203ENST00000469923 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
SHROOM3-203ENST00000469923 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
SHROOM3-203ENST00000469923 CHRNA5P30532 468 aa12.36□□□□□ -0.43
SHROOM3-203ENST00000469923 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
SHROOM3-203ENST00000469923 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
SHROOM3-203ENST00000469923 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
SHROOM3-203ENST00000469923 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
SHROOM3-203ENST00000469923 USP42Q9H9J4 1324 aaKnown RBP12.35□□□□□ -0.43
SHROOM3-203ENST00000469923 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 FCHSD2O94868 740 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 NFIXQ14938 502 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 TJP1Q07157 1748 aa12.34□□□□□ -0.43
SHROOM3-203ENST00000469923 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 POLRMTO00411 1230 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 EIF5P55010 431 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms