RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 TIMMDC1Q9NPL8 285 aa9.75□□□□□ -0.85
VPS8-219ENST00000469479 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
VPS8-219ENST00000469479 RFC5P40937 340 aa9.74□□□□□ -0.85
VPS8-219ENST00000469479 SNRPNP63162 240 aaKnown RBP9.74□□□□□ -0.85
VPS8-219ENST00000469479 LCE3BQ5TA77 95 aa9.74□□□□□ -0.85
VPS8-219ENST00000469479 ZNF592Q92610 1267 aa9.74□□□□□ -0.85
VPS8-219ENST00000469479 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
VPS8-219ENST00000469479 ESF1Q9H501 851 aaKnown RBP9.73□□□□□ -0.85
VPS8-219ENST00000469479 PHF24Q9UPV7 400 aa9.73□□□□□ -0.85
VPS8-219ENST00000469479 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
VPS8-219ENST00000469479 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.86
VPS8-219ENST00000469479 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.86
VPS8-219ENST00000469479 GDF2Q9UK05 429 aaPredicted RBP9.71□□□□□ -0.86
VPS8-219ENST00000469479 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
VPS8-219ENST00000469479 COL8A1P27658 744 aa9.69□□□□□ -0.86
VPS8-219ENST00000469479 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
VPS8-219ENST00000469479 TRAK2O60296 914 aa9.68□□□□□ -0.86
VPS8-219ENST00000469479 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
VPS8-219ENST00000469479 GNRH1P01148 92 aa9.67□□□□□ -0.86
VPS8-219ENST00000469479 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
VPS8-219ENST00000469479 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
VPS8-219ENST00000469479 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
VPS8-219ENST00000469479 SHISA8B8ZZ34 492 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 PIK3R2O00459 728 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 SCTRP47872 440 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 GRIN2CQ14957 1233 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 ZMYM1Q5SVZ6 1142 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 GOLGA6L1Q8N7Z2 621 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 EDARADDQ8WWZ3 215 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 OSBPL3Q9H4L5 887 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 PCDHB11Q9Y5F2 797 aa9.66□□□□□ -0.86
VPS8-219ENST00000469479 A0A1B0GTH6 734 aa9.65□□□□□ -0.86
VPS8-219ENST00000469479 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
VPS8-219ENST00000469479 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
VPS8-219ENST00000469479 C1QTNF9BB2RNN3 333 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
VPS8-219ENST00000469479 CENPCQ03188 943 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 NR1H3Q13133 447 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 KRTAP4-12Q9BQ66 201 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 GPAMQ9HCL2 828 aa9.64□□□□□ -0.87
VPS8-219ENST00000469479 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
VPS8-219ENST00000469479 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
VPS8-219ENST00000469479 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
VPS8-219ENST00000469479 PCMTD1Q96MG8 357 aaPredicted RBP9.63□□□□□ -0.87
VPS8-219ENST00000469479 BTBD11A6QL63 1104 aa9.62□□□□□ -0.87
VPS8-219ENST00000469479 THBS1P07996 1170 aa9.62□□□□□ -0.87
VPS8-219ENST00000469479 GNASQ5JWF2 1037 aa9.62□□□□□ -0.87
VPS8-219ENST00000469479 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
VPS8-219ENST00000469479 ZSCAN10Q96SZ4 725 aaPredicted RBP9.62□□□□□ -0.87
VPS8-219ENST00000469479 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
VPS8-219ENST00000469479 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
VPS8-219ENST00000469479 ITGB7P26010 798 aa9.61□□□□□ -0.87
VPS8-219ENST00000469479 MYCP01106 439 aaPredicted RBP9.6□□□□□ -0.87
VPS8-219ENST00000469479 IL2RAP01589 272 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 AMPD1P23109 780 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 PHKA2P46019 1235 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
VPS8-219ENST00000469479 BMP4P12644 408 aa9.59□□□□□ -0.87
VPS8-219ENST00000469479 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
VPS8-219ENST00000469479 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
VPS8-219ENST00000469479 LINC00114Q6XXX2 140 aa9.59□□□□□ -0.87
VPS8-219ENST00000469479 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
VPS8-219ENST00000469479 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
VPS8-219ENST00000469479 GNB5O14775 395 aa9.58□□□□□ -0.88
VPS8-219ENST00000469479 SUV39H2Q9H5I1 410 aa9.58□□□□□ -0.88
VPS8-219ENST00000469479 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
VPS8-219ENST00000469479 DOC2BQ14184 412 aa9.57□□□□□ -0.88
VPS8-219ENST00000469479 ESCO1Q5FWF5 840 aa9.57□□□□□ -0.88
VPS8-219ENST00000469479 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
VPS8-219ENST00000469479 FGFR3P22607 806 aa9.56□□□□□ -0.88
VPS8-219ENST00000469479 MSX1P28360 303 aa9.56□□□□□ -0.88
VPS8-219ENST00000469479 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
VPS8-219ENST00000469479 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
VPS8-219ENST00000469479 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
VPS8-219ENST00000469479 C2CD2LO14523 706 aa9.55□□□□□ -0.88
VPS8-219ENST00000469479 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
VPS8-219ENST00000469479 ABHD17AQ96GS6 310 aa9.55□□□□□ -0.88
VPS8-219ENST00000469479 BTBD6Q96KE9 485 aa9.55□□□□□ -0.88
VPS8-219ENST00000469479 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
VPS8-219ENST00000469479 EPXP11678 715 aa9.54□□□□□ -0.88
VPS8-219ENST00000469479 CHRNA4P43681 627 aa9.54□□□□□ -0.88
VPS8-219ENST00000469479 NDFIP2Q9NV92 336 aa9.54□□□□□ -0.88
VPS8-219ENST00000469479 SOCS7O14512 581 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 ARAFP10398 606 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 CTBSQ01459 385 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 RHBDD1Q8TEB9 315 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 KRTAP9-9Q9BYP9 154 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 KRTAP9-4Q9BYQ2 154 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 CRISPLD1Q9H336 500 aa9.53□□□□□ -0.88
VPS8-219ENST00000469479 HMGXB3Q12766 1538 aa9.52□□□□□ -0.88
VPS8-219ENST00000469479 BNIP3LO60238 219 aa9.52□□□□□ -0.89
VPS8-219ENST00000469479 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
VPS8-219ENST00000469479 BANK1Q8NDB2 785 aa9.51□□□□□ -0.89
VPS8-219ENST00000469479 CEP126Q9P2H0 1117 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms