RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
CMC1-208ENST00000469102 PALM3A6NDB9 673 aaPredicted RBP9.66□□□□□ -0.86
CMC1-208ENST00000469102 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
CMC1-208ENST00000469102 TLR1Q15399 786 aa9.66□□□□□ -0.86
CMC1-208ENST00000469102 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
CMC1-208ENST00000469102 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
CMC1-208ENST00000469102 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
CMC1-208ENST00000469102 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
CMC1-208ENST00000469102 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
CMC1-208ENST00000469102 CLDN10P78369 228 aa9.65□□□□□ -0.86
CMC1-208ENST00000469102 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
CMC1-208ENST00000469102 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
CMC1-208ENST00000469102 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
CMC1-208ENST00000469102 SERTAD1Q9UHV2 236 aa9.65□□□□□ -0.86
CMC1-208ENST00000469102 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
CMC1-208ENST00000469102 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.86
CMC1-208ENST00000469102 SMTNP53814 917 aa9.64□□□□□ -0.87
CMC1-208ENST00000469102 C4orf17Q53FE4 359 aa9.64□□□□□ -0.87
CMC1-208ENST00000469102 ZNF295-AS1Q8N0V1 137 aa9.64□□□□□ -0.87
CMC1-208ENST00000469102 PHKA2P46019 1235 aa9.63□□□□□ -0.87
CMC1-208ENST00000469102 TMEM214Q6NUQ4 689 aaKnown RBP9.63□□□□□ -0.87
CMC1-208ENST00000469102 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
CMC1-208ENST00000469102 TIMMDC1Q9NPL8 285 aa9.63□□□□□ -0.87
CMC1-208ENST00000469102 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CMC1-208ENST00000469102 DKK1O94907 266 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 LORP23490 312 aaPredicted RBP9.62□□□□□ -0.87
CMC1-208ENST00000469102 KRT76Q01546 638 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 MTFR1Q15390 333 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 USP3Q9Y6I4 520 aa9.62□□□□□ -0.87
CMC1-208ENST00000469102 CDC14CA4D256 554 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 A6NJY4 79 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 PSME1Q06323 249 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 DBN1Q16643 649 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
CMC1-208ENST00000469102 GAS2L1Q99501 681 aaPredicted RBP9.61□□□□□ -0.87
CMC1-208ENST00000469102 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
CMC1-208ENST00000469102 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
CMC1-208ENST00000469102 CCDC102BQ68D86 513 aa9.6□□□□□ -0.87
CMC1-208ENST00000469102 SV2AQ7L0J3 742 aa9.6□□□□□ -0.87
CMC1-208ENST00000469102 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
CMC1-208ENST00000469102 TPCN2Q8NHX9 752 aa9.6□□□□□ -0.87
CMC1-208ENST00000469102 ZNF837Q96EG3 531 aaPredicted RBP9.6□□□□□ -0.87
CMC1-208ENST00000469102 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
CMC1-208ENST00000469102 CDK2AP1O14519 115 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 F11P03951 625 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 THBS1P07996 1170 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 EPHA4P54764 986 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 RIPOR1Q6ZS17 1223 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 LARGE2Q8N3Y3 721 aa9.59□□□□□ -0.87
CMC1-208ENST00000469102 GTF2E1P29083 439 aaPredicted RBP9.58□□□□□ -0.88
CMC1-208ENST00000469102 LMOD1P29536 600 aaPredicted RBP9.58□□□□□ -0.88
CMC1-208ENST00000469102 COL25A1Q9BXS0 654 aaPredicted RBP9.58□□□□□ -0.88
CMC1-208ENST00000469102 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 BACH1O14867 736 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 FOXK2Q01167 660 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 SIX5Q8N196 739 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
CMC1-208ENST00000469102 GPAMQ9HCL2 828 aa9.57□□□□□ -0.88
CMC1-208ENST00000469102 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
CMC1-208ENST00000469102 RASA1P20936 1047 aa9.56□□□□□ -0.88
CMC1-208ENST00000469102 MSX1P28360 303 aa9.56□□□□□ -0.88
CMC1-208ENST00000469102 PLA2G4AP47712 749 aa9.56□□□□□ -0.88
CMC1-208ENST00000469102 GMCL1Q96IK5 515 aa9.56□□□□□ -0.88
CMC1-208ENST00000469102 NIFKQ9BYG3 293 aaKnown RBP9.56□□□□□ -0.88
CMC1-208ENST00000469102 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
CMC1-208ENST00000469102 GAS6Q14393 721 aa9.55□□□□□ -0.88
CMC1-208ENST00000469102 CRTC2Q53ET0 693 aaPredicted RBP9.55□□□□□ -0.88
CMC1-208ENST00000469102 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
CMC1-208ENST00000469102 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
CMC1-208ENST00000469102 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
CMC1-208ENST00000469102 PTK7Q13308 1070 aa9.54□□□□□ -0.88
CMC1-208ENST00000469102 H7C1W4 665 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 M0R2N6 131 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 GPR25O00155 361 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 ATP4AP20648 1035 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 UBAP2LQ14157 1087 aaKnown RBP9.53□□□□□ -0.88
CMC1-208ENST00000469102 TBCELQ5QJ74 424 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 GTPBP3Q969Y2 492 aaKnown RBP9.53□□□□□ -0.88
CMC1-208ENST00000469102 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
CMC1-208ENST00000469102 SLC9A9Q8IVB4 645 aa9.52□□□□□ -0.89
CMC1-208ENST00000469102 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
CMC1-208ENST00000469102 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
CMC1-208ENST00000469102 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
CMC1-208ENST00000469102 CABP1Q9NZU7 370 aa9.52□□□□□ -0.89
CMC1-208ENST00000469102 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
CMC1-208ENST00000469102 ZSCAN1Q8NBB4 408 aa9.51□□□□□ -0.89
CMC1-208ENST00000469102 AIDAQ96BJ3 306 aa9.51□□□□□ -0.89
CMC1-208ENST00000469102 ARID3CA6NKF2 412 aa9.5□□□□□ -0.89
CMC1-208ENST00000469102 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
CMC1-208ENST00000469102 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
CMC1-208ENST00000469102 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
CMC1-208ENST00000469102 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms