RNA–Protein interactions for RNA: ENST00000468890.1

NHLRC2-202, Transcript of NHL repeat containing 2, humanhuman

TSL 2

Gene NHLRC2, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2-202ENST00000468890 COL13A1Q5TAT6 717 aaPredicted RBP25.79■■□□□ 1.72
NHLRC2-202ENST00000468890 TGFB2P61812 414 aa25.78■■□□□ 1.72
NHLRC2-202ENST00000468890 TMOD3Q9NYL9 352 aa25.78■■□□□ 1.72
NHLRC2-202ENST00000468890 BRCA1P38398 1863 aaKnown RBP25.77■■□□□ 1.72
NHLRC2-202ENST00000468890 DPEP1P16444 411 aa25.77■■□□□ 1.72
NHLRC2-202ENST00000468890 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
NHLRC2-202ENST00000468890 ATG3Q9NT62 314 aa25.76■■□□□ 1.71
NHLRC2-202ENST00000468890 TONSLQ96HA7 1378 aa25.75■■□□□ 1.71
NHLRC2-202ENST00000468890 SPG7Q9UQ90 795 aa25.75■■□□□ 1.71
NHLRC2-202ENST00000468890 C4AP0C0L4 1744 aa25.74■■□□□ 1.71
NHLRC2-202ENST00000468890 FCHSD2O94868 740 aa25.74■■□□□ 1.71
NHLRC2-202ENST00000468890 RBM46Q8TBY0 533 aaKnown RBP25.74■■□□□ 1.71
NHLRC2-202ENST00000468890 SLC4A9Q96Q91 983 aa25.74■■□□□ 1.71
NHLRC2-202ENST00000468890 KDRP35968 1356 aa25.73■■□□□ 1.71
NHLRC2-202ENST00000468890 CAPN15O75808 1086 aa25.73■■□□□ 1.71
NHLRC2-202ENST00000468890 C9orf131Q5VYM1 1079 aa25.73■■□□□ 1.71
NHLRC2-202ENST00000468890 KLRG1Q96E93 195 aa25.73■■□□□ 1.71
NHLRC2-202ENST00000468890 TMF1P82094 1093 aa25.72■■□□□ 1.71
NHLRC2-202ENST00000468890 PPM1GO15355 546 aaPredicted RBP25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 PHKG2P15735 406 aa25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 KCNA3P22001 575 aa25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 TRAPPC3LQ5T215 181 aa25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 ARHGEF1Q92888 912 aaKnown RBP25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 RTCBQ9Y3I0 505 aaKnown RBP25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 KCPQ6ZWJ8 1503 aa25.71■■□□□ 1.71
NHLRC2-202ENST00000468890 GYS1P13807 737 aa25.7■■□□□ 1.7
NHLRC2-202ENST00000468890 NLGN1Q8N2Q7 840 aa25.7■■□□□ 1.7
NHLRC2-202ENST00000468890 JMYQ8N9B5 988 aa25.7■■□□□ 1.7
NHLRC2-202ENST00000468890 EYA1Q99502 592 aa25.7■■□□□ 1.7
NHLRC2-202ENST00000468890 ANKRD26Q9UPS8 1709 aa25.7■■□□□ 1.7
NHLRC2-202ENST00000468890 COL5A3P25940 1745 aaPredicted RBP25.69■■□□□ 1.7
NHLRC2-202ENST00000468890 CARD14Q9BXL6 1004 aa25.69■■□□□ 1.7
NHLRC2-202ENST00000468890 CCDC87Q9NVE4 849 aa25.69■■□□□ 1.7
NHLRC2-202ENST00000468890 ARFGEF1Q9Y6D6 1849 aa25.69■■□□□ 1.7
NHLRC2-202ENST00000468890 PCNTO95613 3336 aa25.69■■□□□ 1.7
NHLRC2-202ENST00000468890 C16orf71Q8IYS4 520 aaPredicted RBP25.67■■□□□ 1.7
NHLRC2-202ENST00000468890 IFNL2Q8IZJ0 200 aa25.67■■□□□ 1.7
NHLRC2-202ENST00000468890 RBM42Q9BTD8 480 aaKnown RBP25.66■■□□□ 1.7
NHLRC2-202ENST00000468890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.66■■□□□ 1.72e-6■■■□□ 15.7
NHLRC2-202ENST00000468890 SLC24A1O60721 1099 aa25.65■■□□□ 1.7
NHLRC2-202ENST00000468890 PARP3Q9Y6F1 533 aa25.65■■□□□ 1.7
NHLRC2-202ENST00000468890 PLEKHG2Q9H7P9 1386 aa25.65■■□□□ 1.7
NHLRC2-202ENST00000468890 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.7
NHLRC2-202ENST00000468890 FSTL1Q12841 308 aa25.64■■□□□ 1.7
NHLRC2-202ENST00000468890 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
NHLRC2-202ENST00000468890 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
NHLRC2-202ENST00000468890 MYH14Q7Z406 1995 aaKnown RBP25.63■■□□□ 1.69
NHLRC2-202ENST00000468890 RFC4P35249 363 aa25.62■■□□□ 1.69
NHLRC2-202ENST00000468890 DCAF5Q96JK2 942 aa25.62■■□□□ 1.69
NHLRC2-202ENST00000468890 RNF181Q9P0P0 153 aa25.62■■□□□ 1.69
NHLRC2-202ENST00000468890 CNTNAP4Q9C0A0 1308 aa25.62■■□□□ 1.69
NHLRC2-202ENST00000468890 RPS6KA4O75676 772 aa25.61■■□□□ 1.69
NHLRC2-202ENST00000468890 ADRA2BP18089 450 aa25.61■■□□□ 1.69
NHLRC2-202ENST00000468890 RC3H1Q5TC82 1133 aaKnown RBP25.61■■□□□ 1.69
NHLRC2-202ENST00000468890 TNS4Q8IZW8 715 aa25.6■■□□□ 1.69
NHLRC2-202ENST00000468890 PIM2Q9P1W9 311 aa25.6■■□□□ 1.69
NHLRC2-202ENST00000468890 SRP68Q9UHB9 627 aaKnown RBP25.6■■□□□ 1.69
NHLRC2-202ENST00000468890 TNRC6CQ9HCJ0 1690 aaKnown RBP25.6■■□□□ 1.69
NHLRC2-202ENST00000468890 SBF1O95248 1867 aa25.59■■□□□ 1.69
NHLRC2-202ENST00000468890 KDM2BQ8NHM5 1336 aa25.59■■□□□ 1.69
NHLRC2-202ENST00000468890 CHRNA5P30532 468 aa25.58■■□□□ 1.69
NHLRC2-202ENST00000468890 DDR1Q08345 913 aa25.58■■□□□ 1.69
NHLRC2-202ENST00000468890 DALRD3Q5D0E6 543 aaKnown RBP25.57■■□□□ 1.68
NHLRC2-202ENST00000468890 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
NHLRC2-202ENST00000468890 EIF4A2Q14240 407 aaKnown RBP25.56■■□□□ 1.68
NHLRC2-202ENST00000468890 FKBP8Q14318 412 aa25.56■■□□□ 1.68
NHLRC2-202ENST00000468890 KDM6AO15550 1401 aaPredicted RBP25.55■■□□□ 1.68
NHLRC2-202ENST00000468890 PRELPP51888 382 aa25.55■■□□□ 1.68
NHLRC2-202ENST00000468890 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
NHLRC2-202ENST00000468890 RASSF7Q02833 373 aa25.53■■□□□ 1.68
NHLRC2-202ENST00000468890 SMC1BQ8NDV3 1235 aa25.52■■□□□ 1.68
NHLRC2-202ENST00000468890 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
NHLRC2-202ENST00000468890 TJP1Q07157 1748 aa25.51■■□□□ 1.68
NHLRC2-202ENST00000468890 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
NHLRC2-202ENST00000468890 CRKLP46109 303 aaKnown RBP25.51■■□□□ 1.67
NHLRC2-202ENST00000468890 ADAMTS7Q9UKP4 1686 aa25.51■■□□□ 1.67
NHLRC2-202ENST00000468890 HSPA1AP0DMV8 641 aaKnown RBP25.49■■□□□ 1.67
NHLRC2-202ENST00000468890 HSPA1BP0DMV9 641 aaKnown RBP25.49■■□□□ 1.67
NHLRC2-202ENST00000468890 TNNT2P45379 298 aaPredicted RBP25.49■■□□□ 1.67
NHLRC2-202ENST00000468890 POLRMTO00411 1230 aaKnown RBP25.48■■□□□ 1.67
NHLRC2-202ENST00000468890 CABP4P57796 275 aa25.48■■□□□ 1.67
NHLRC2-202ENST00000468890 CDCA8Q53HL2 280 aa25.48■■□□□ 1.67
NHLRC2-202ENST00000468890 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
NHLRC2-202ENST00000468890 ZNF530Q6P9A1 599 aaPredicted RBP25.46■■□□□ 1.67
NHLRC2-202ENST00000468890 TM4SF1P30408 202 aa25.45■■□□□ 1.66
NHLRC2-202ENST00000468890 PLEKHO1Q53GL0 409 aaPredicted RBP25.43■■□□□ 1.66
NHLRC2-202ENST00000468890 INTS5Q6P9B9 1019 aaKnown RBP25.43■■□□□ 1.66
NHLRC2-202ENST00000468890 TIAM2Q8IVF5 1701 aa25.43■■□□□ 1.66
NHLRC2-202ENST00000468890 AFDNP55196 1824 aaKnown RBP25.42■■□□□ 1.66
NHLRC2-202ENST00000468890 USPL1Q5W0Q7 1092 aa25.42■■□□□ 1.66
NHLRC2-202ENST00000468890 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
NHLRC2-202ENST00000468890 GLTPD2A6NH11 291 aa25.41■■□□□ 1.66
NHLRC2-202ENST00000468890 MTHFSP49914 203 aa25.4■■□□□ 1.66
NHLRC2-202ENST00000468890 AEBP1Q8IUX7 1158 aa25.4■■□□□ 1.66
NHLRC2-202ENST00000468890 ZC3H4Q9UPT8 1303 aaKnown RBP25.39■■□□□ 1.66
NHLRC2-202ENST00000468890 DLEC1Q9Y238 1755 aa25.39■■□□□ 1.66
NHLRC2-202ENST00000468890 CCDC88AQ3V6T2 1871 aa25.39■■□□□ 1.66
NHLRC2-202ENST00000468890 VEGFAP15692 232 aaPredicted RBP25.39■■□□□ 1.66
NHLRC2-202ENST00000468890 LMNB1P20700 586 aa25.39■■□□□ 1.66
NHLRC2-202ENST00000468890 NRXN2Q9P2S2 1712 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 255.4 ms