RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 ERVV-2B6SEH9 535 aa19.8■□□□□ 0.76
COL16A1-208ENST00000468459 SMIM5Q71RC9 77 aa19.8■□□□□ 0.76
COL16A1-208ENST00000468459 C5P01031 1676 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 PLEKHO1Q53GL0 409 aaPredicted RBP19.79■□□□□ 0.76
COL16A1-208ENST00000468459 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 AK7Q96M32 723 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 KDRP35968 1356 aa19.79■□□□□ 0.76
COL16A1-208ENST00000468459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
COL16A1-208ENST00000468459 DIAPH1O60610 1272 aaKnown RBP19.78■□□□□ 0.76
COL16A1-208ENST00000468459 ZNF784Q8NCA9 323 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-208ENST00000468459 SLC4A9Q96Q91 983 aa19.78■□□□□ 0.76
COL16A1-208ENST00000468459 ITGB4P16144 1822 aa19.78■□□□□ 0.76
COL16A1-208ENST00000468459 KDM6AO15550 1401 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-208ENST00000468459 C4BP0C0L5 1744 aa19.77■□□□□ 0.76
COL16A1-208ENST00000468459 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
COL16A1-208ENST00000468459 SSFA2P28290 1259 aa19.77■□□□□ 0.76
COL16A1-208ENST00000468459 ATP6V1AP38606 617 aa19.77■□□□□ 0.76
COL16A1-208ENST00000468459 GPR162Q16538 588 aa19.77■□□□□ 0.76
COL16A1-208ENST00000468459 CFAP53Q96M91 514 aa19.77■□□□□ 0.76
COL16A1-208ENST00000468459 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
COL16A1-208ENST00000468459 ZNF530Q6P9A1 599 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-208ENST00000468459 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
COL16A1-208ENST00000468459 TAF1LQ8IZX4 1826 aa19.74■□□□□ 0.75
COL16A1-208ENST00000468459 U2SURPO15042 1029 aaKnown RBP19.74■□□□□ 0.75
COL16A1-208ENST00000468459 ANP32CO43423 234 aa19.74■□□□□ 0.75
COL16A1-208ENST00000468459 PHF14O94880 888 aa19.74■□□□□ 0.75
COL16A1-208ENST00000468459 HMOX1P09601 288 aa19.73■□□□□ 0.75
COL16A1-208ENST00000468459 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL16A1-208ENST00000468459 GNPATO15228 680 aa19.72■□□□□ 0.75
COL16A1-208ENST00000468459 CABP4P57796 275 aa19.71■□□□□ 0.75
COL16A1-208ENST00000468459 CCDC184Q52MB2 194 aa19.7■□□□□ 0.74
COL16A1-208ENST00000468459 C1orf141Q5JVX7 400 aa19.69■□□□□ 0.74
COL16A1-208ENST00000468459 RC3H1Q5TC82 1133 aaKnown RBP19.69■□□□□ 0.74
COL16A1-208ENST00000468459 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
COL16A1-208ENST00000468459 NFATC2IPQ8NCF5 419 aa19.69■□□□□ 0.74
COL16A1-208ENST00000468459 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
COL16A1-208ENST00000468459 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
COL16A1-208ENST00000468459 CNTNAP4Q9C0A0 1308 aa19.68■□□□□ 0.74
COL16A1-208ENST00000468459 GRIN3BO60391 1043 aa19.67■□□□□ 0.74
COL16A1-208ENST00000468459 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-208ENST00000468459 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL16A1-208ENST00000468459 NUDCQ9Y266 331 aa19.67■□□□□ 0.74
COL16A1-208ENST00000468459 AKAP4Q5JQC9 854 aa19.66■□□□□ 0.74
COL16A1-208ENST00000468459 TRAPPC3LQ5T215 181 aa19.66■□□□□ 0.74
COL16A1-208ENST00000468459 RTCBQ9Y3I0 505 aaKnown RBP19.66■□□□□ 0.74
COL16A1-208ENST00000468459 RPS6KA4O75676 772 aa19.65■□□□□ 0.74
COL16A1-208ENST00000468459 ADRA2BP18089 450 aa19.65■□□□□ 0.74
COL16A1-208ENST00000468459 ARHGEF1Q92888 912 aaKnown RBP19.65■□□□□ 0.74
COL16A1-208ENST00000468459 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
COL16A1-208ENST00000468459 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
COL16A1-208ENST00000468459 LGR6Q9HBX8 967 aa19.64■□□□□ 0.73
COL16A1-208ENST00000468459 ZNF831Q5JPB2 1677 aa19.64■□□□□ 0.73
COL16A1-208ENST00000468459 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
COL16A1-208ENST00000468459 MMP10P09238 476 aa19.63■□□□□ 0.73
COL16A1-208ENST00000468459 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
COL16A1-208ENST00000468459 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
COL16A1-208ENST00000468459 SLC52A2Q9HAB3 445 aa19.62■□□□□ 0.73
COL16A1-208ENST00000468459 GYS1P13807 737 aa19.61■□□□□ 0.73
COL16A1-208ENST00000468459 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
COL16A1-208ENST00000468459 CHD4Q14839 1912 aa19.61■□□□□ 0.73
COL16A1-208ENST00000468459 RNMTO43148 476 aaKnown RBP19.6■□□□□ 0.73
COL16A1-208ENST00000468459 PHACTR3Q96KR7 559 aa19.6■□□□□ 0.73
COL16A1-208ENST00000468459 CRKLP46109 303 aaKnown RBP19.59■□□□□ 0.73
COL16A1-208ENST00000468459 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
COL16A1-208ENST00000468459 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
COL16A1-208ENST00000468459 FCHSD2O94868 740 aa19.58■□□□□ 0.72
COL16A1-208ENST00000468459 RFC4P35249 363 aa19.58■□□□□ 0.72
COL16A1-208ENST00000468459 MRC1P22897 1456 aa19.58■□□□□ 0.72
COL16A1-208ENST00000468459 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL16A1-208ENST00000468459 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-208ENST00000468459 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
COL16A1-208ENST00000468459 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
COL16A1-208ENST00000468459 C1QTNF8P60827 252 aa19.55■□□□□ 0.72
COL16A1-208ENST00000468459 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
COL16A1-208ENST00000468459 WWC3Q9ULE0 1092 aa19.55■□□□□ 0.72
COL16A1-208ENST00000468459 ADAMTS8Q9UP79 889 aa19.55■□□□□ 0.72
COL16A1-208ENST00000468459 MYH14Q7Z406 1995 aaKnown RBP19.55■□□□□ 0.72
COL16A1-208ENST00000468459 PXDNLA1KZ92 1463 aa19.54■□□□□ 0.72
COL16A1-208ENST00000468459 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
COL16A1-208ENST00000468459 C10orf71Q711Q0 1435 aa19.54■□□□□ 0.72
COL16A1-208ENST00000468459 TGFB2P61812 414 aa19.54■□□□□ 0.72
COL16A1-208ENST00000468459 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
COL16A1-208ENST00000468459 SRP68Q9UHB9 627 aaKnown RBP19.54■□□□□ 0.72
COL16A1-208ENST00000468459 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
COL16A1-208ENST00000468459 CYP19A1P11511 503 aaPredicted RBP19.53■□□□□ 0.72
COL16A1-208ENST00000468459 FKBP8Q14318 412 aa19.53■□□□□ 0.72
COL16A1-208ENST00000468459 MIER1Q8N108 512 aa19.53■□□□□ 0.72
COL16A1-208ENST00000468459 ADCY9O60503 1353 aa19.53■□□□□ 0.72
COL16A1-208ENST00000468459 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.72
COL16A1-208ENST00000468459 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
COL16A1-208ENST00000468459 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
COL16A1-208ENST00000468459 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
COL16A1-208ENST00000468459 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
COL16A1-208ENST00000468459 DDR1Q08345 913 aa19.51■□□□□ 0.71
COL16A1-208ENST00000468459 VSIG10Q8N0Z9 540 aa19.51■□□□□ 0.71
COL16A1-208ENST00000468459 GAS2L2Q8NHY3 880 aa19.51■□□□□ 0.71
COL16A1-208ENST00000468459 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
COL16A1-208ENST00000468459 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms