RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MTMR3Q13615 1198 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 NAA30Q147X3 362 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 OCLNQ16625 522 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 ERFEQ4G0M1 354 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 NPAS4Q8IUM7 802 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 FOXJ1Q92949 421 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 VTI1AQ96AJ9 217 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 ATP13A2Q9NQ11 1180 aa5.8□□□□□ -1.48
HMGB1P25-201ENST00000468402 TERTO14746 1132 aaKnown RBP5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 C21orf2O43822 256 aa5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 CRIPAKQ8N1N5 446 aa5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 TSEN2Q8NCE0 465 aaKnown RBP5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 TMC1Q8TDI8 760 aa5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 DCTN4Q9UJW0 460 aa5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 PCDHGA11Q9Y5H2 935 aa5.79□□□□□ -1.48
HMGB1P25-201ENST00000468402 DKK1O94907 266 aa5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 SNRPBP14678 240 aaKnown RBP5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 NFX1Q12986 1120 aaKnown RBP5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 SF3B2Q13435 895 aaKnown RBP5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 AAMPQ13685 434 aa5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 GAS2L2Q8NHY3 880 aa5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 KIFC2Q96AC6 838 aa5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 DNMT3AQ9Y6K1 912 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P25-201ENST00000468402 PTCD1O75127 700 aaKnown RBP5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 EAPPQ56P03 285 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 SH3RF1Q7Z6J0 888 aa5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 ZNF511Q8NB15 262 aa5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 SNIP1Q8TAD8 396 aaKnown RBP5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 CHMP7Q8WUX9 453 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 IGSF5Q9NSI5 407 aa5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 TOR4AQ9NXH8 423 aa5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 PPP1R1BQ9UD71 204 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P25-201ENST00000468402 WIPF1O43516 503 aa5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 AVPP01185 164 aa5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 TAGLNQ01995 201 aaKnown RBP5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 FKBP5Q13451 457 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 TSNAXIP1Q2TAA8 658 aa5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 ASB16Q96NS5 453 aa5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 CDV3Q9UKY7 258 aaKnown RBP5.76□□□□□ -1.49
HMGB1P25-201ENST00000468402 FAM13AO94988 1023 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 WEE1P30291 646 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 CCDC125Q86Z20 511 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 SEPT12Q8IYM1 358 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 ZSCAN1Q8NBB4 408 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 SCG3Q8WXD2 468 aaKnown RBP5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 TRIM47Q96LD4 638 aa5.75□□□□□ -1.49
HMGB1P25-201ENST00000468402 BACH1O14867 736 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 NDUFB5O43674 189 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 ARID5BQ14865 1188 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 IRF7Q92985 503 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 PURBQ96QR8 312 aaKnown RBP5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 KCTD15Q96SI1 283 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 ZNF358Q9NW07 568 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 BRPF3Q9ULD4 1205 aa5.74□□□□□ -1.49
HMGB1P25-201ENST00000468402 J3QL48 77 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 M0R2N6 131 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 ALDH1A1P00352 501 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 HMGB1P09429 215 aaKnown RBP5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 VEGFBP49765 207 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 VASH1Q7L8A9 365 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 FBXO33Q7Z6M2 555 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 TNS4Q8IZW8 715 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 HELQQ8TDG4 1101 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 MRGPRX2Q96LB1 330 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 SERTAD1Q9UHV2 236 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 WASF2Q9Y6W5 498 aa5.73□□□□□ -1.49
HMGB1P25-201ENST00000468402 ATAD2Q6PL18 1390 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 ESPNB1AK53 854 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 IGFBP4P22692 258 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 ARHGAP4P98171 946 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 XPCQ01831 940 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 TRIM32Q13049 653 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 RGL4Q8IZJ4 473 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 TRIM52Q96A61 297 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 DRC1Q96MC2 740 aa5.72□□□□□ -1.49
HMGB1P25-201ENST00000468402 ERVH48-1M5A8F1 160 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 WNT7AO00755 349 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 FOXO3O43524 673 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 PPP1R12BO60237 982 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 SMPD1P17405 629 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 VAMP1P23763 118 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 SCTRP47872 440 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 SH3BP2P78314 561 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 MRS2Q9HD23 443 aa5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 NXF1Q9UBU9 619 aaKnown RBP5.71□□□□□ -1.5
HMGB1P25-201ENST00000468402 MPSTP25325 297 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 ERCC5P28715 1186 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 GMPRP36959 345 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 MAPK8P45983 427 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 GDF10P55107 478 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 ZC3H6P61129 1189 aaKnown RBP5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 PLCB3Q01970 1234 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 ECM1Q16610 540 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms