RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
SGIP1-207ENST00000468286 GOLGA6L1Q8N7Z2 621 aa12.13□□□□□ -0.47
SGIP1-207ENST00000468286 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
SGIP1-207ENST00000468286 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
SGIP1-207ENST00000468286 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
SGIP1-207ENST00000468286 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
SGIP1-207ENST00000468286 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
SGIP1-207ENST00000468286 NR1H3Q13133 447 aa12.11□□□□□ -0.47
SGIP1-207ENST00000468286 Q8N3U1 123 aa12.11□□□□□ -0.47
SGIP1-207ENST00000468286 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
SGIP1-207ENST00000468286 KRTAP4-8Q9BYQ9 185 aa12.11□□□□□ -0.47
SGIP1-207ENST00000468286 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
SGIP1-207ENST00000468286 CENPCQ03188 943 aa12.1□□□□□ -0.47
SGIP1-207ENST00000468286 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
SGIP1-207ENST00000468286 PIK3R2O00459 728 aa12.09□□□□□ -0.47
SGIP1-207ENST00000468286 IL2RAP01589 272 aa12.09□□□□□ -0.47
SGIP1-207ENST00000468286 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
SGIP1-207ENST00000468286 LINC00114Q6XXX2 140 aa12.09□□□□□ -0.47
SGIP1-207ENST00000468286 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
SGIP1-207ENST00000468286 ATXN7L1Q9ULK2 861 aaPredicted RBP12.09□□□□□ -0.47
SGIP1-207ENST00000468286 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
SGIP1-207ENST00000468286 FURINP09958 794 aa12.08□□□□□ -0.48
SGIP1-207ENST00000468286 SLCO4C1Q6ZQN7 724 aa12.08□□□□□ -0.48
SGIP1-207ENST00000468286 RAB6BQ9NRW1 208 aa12.08□□□□□ -0.48
SGIP1-207ENST00000468286 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
SGIP1-207ENST00000468286 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
SGIP1-207ENST00000468286 PGBD3Q8N328 593 aa12.06□□□□□ -0.48
SGIP1-207ENST00000468286 GNB5O14775 395 aa12.05□□□□□ -0.48
SGIP1-207ENST00000468286 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
SGIP1-207ENST00000468286 XAGE2Q96GT9 111 aa12.05□□□□□ -0.48
SGIP1-207ENST00000468286 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
SGIP1-207ENST00000468286 FHDC1Q9C0D6 1143 aaPredicted RBP12.05□□□□□ -0.48
SGIP1-207ENST00000468286 BMP4P12644 408 aa12.04□□□□□ -0.48
SGIP1-207ENST00000468286 PHKA2P46019 1235 aa12.04□□□□□ -0.48
SGIP1-207ENST00000468286 GRIN2CQ14957 1233 aa12.04□□□□□ -0.48
SGIP1-207ENST00000468286 NDFIP2Q9NV92 336 aa12.04□□□□□ -0.48
SGIP1-207ENST00000468286 C2CD2LO14523 706 aa12.03□□□□□ -0.48
SGIP1-207ENST00000468286 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
SGIP1-207ENST00000468286 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
SGIP1-207ENST00000468286 SUV39H2Q9H5I1 410 aa12.03□□□□□ -0.48
SGIP1-207ENST00000468286 SOCS7O14512 581 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 MYCP01106 439 aaPredicted RBP12.02□□□□□ -0.49
SGIP1-207ENST00000468286 AMPD1P23109 780 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 MSX1P28360 303 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 C4orf17Q53FE4 359 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 RUBCNLQ9H714 662 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
SGIP1-207ENST00000468286 FGFR3P22607 806 aa12.01□□□□□ -0.49
SGIP1-207ENST00000468286 C1QTNF9BB2RNN3 333 aa12□□□□□ -0.49
SGIP1-207ENST00000468286 EPXP11678 715 aa12□□□□□ -0.49
SGIP1-207ENST00000468286 TMEM214Q6NUQ4 689 aaKnown RBP12□□□□□ -0.49
SGIP1-207ENST00000468286 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
SGIP1-207ENST00000468286 CRISPLD1Q9H336 500 aa12□□□□□ -0.49
SGIP1-207ENST00000468286 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
SGIP1-207ENST00000468286 ARAFP10398 606 aa11.99□□□□□ -0.49
SGIP1-207ENST00000468286 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
SGIP1-207ENST00000468286 CD163Q86VB7 1156 aa11.99□□□□□ -0.49
SGIP1-207ENST00000468286 BTBD6Q96KE9 485 aa11.99□□□□□ -0.49
SGIP1-207ENST00000468286 BNIP3LO60238 219 aa11.98□□□□□ -0.49
SGIP1-207ENST00000468286 GPR37L1O60883 481 aa11.98□□□□□ -0.49
SGIP1-207ENST00000468286 DGKGP49619 791 aa11.98□□□□□ -0.49
SGIP1-207ENST00000468286 CTBSQ01459 385 aa11.97□□□□□ -0.49
SGIP1-207ENST00000468286 RHBDD1Q8TEB9 315 aa11.97□□□□□ -0.49
SGIP1-207ENST00000468286 FIGNL1Q6PIW4 674 aa11.96□□□□□ -0.49
SGIP1-207ENST00000468286 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
SGIP1-207ENST00000468286 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
SGIP1-207ENST00000468286 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
SGIP1-207ENST00000468286 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
SGIP1-207ENST00000468286 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
SGIP1-207ENST00000468286 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
SGIP1-207ENST00000468286 CEP126Q9P2H0 1117 aa11.95□□□□□ -0.5
SGIP1-207ENST00000468286 NDUFB9Q9Y6M9 179 aa11.94□□□□□ -0.5
SGIP1-207ENST00000468286 CHRNA4P43681 627 aa11.93□□□□□ -0.5
SGIP1-207ENST00000468286 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
SGIP1-207ENST00000468286 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
SGIP1-207ENST00000468286 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
SGIP1-207ENST00000468286 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
SGIP1-207ENST00000468286 ITGB7P26010 798 aa11.91□□□□□ -0.5
SGIP1-207ENST00000468286 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
SGIP1-207ENST00000468286 NLRP8Q86W28 1048 aa11.9□□□□□ -0.5
SGIP1-207ENST00000468286 ETNK1Q9HBU6 452 aa11.9□□□□□ -0.5
SGIP1-207ENST00000468286 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
SGIP1-207ENST00000468286 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
SGIP1-207ENST00000468286 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
SGIP1-207ENST00000468286 ZCCHC2Q9C0B9 1178 aaKnown RBP11.89□□□□□ -0.51
SGIP1-207ENST00000468286 APBB1O00213 710 aa11.88□□□□□ -0.51
SGIP1-207ENST00000468286 USP4Q13107 963 aa11.88□□□□□ -0.51
SGIP1-207ENST00000468286 TLR1Q15399 786 aa11.88□□□□□ -0.51
SGIP1-207ENST00000468286 FAM182BQ5T319 152 aa11.88□□□□□ -0.51
SGIP1-207ENST00000468286 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
SGIP1-207ENST00000468286 ADH6P28332 368 aa11.87□□□□□ -0.51
SGIP1-207ENST00000468286 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.86□□□□□ -0.51
SGIP1-207ENST00000468286 ATP4AP20648 1035 aa11.86□□□□□ -0.51
SGIP1-207ENST00000468286 KRTAP9-2Q9BYQ4 174 aa11.86□□□□□ -0.51
SGIP1-207ENST00000468286 PLA2G4AP47712 749 aa11.85□□□□□ -0.51
SGIP1-207ENST00000468286 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
SGIP1-207ENST00000468286 ATXN7O15265 892 aaPredicted RBP11.84□□□□□ -0.51
SGIP1-207ENST00000468286 PHTF2Q8N3S3 785 aa11.84□□□□□ -0.51
SGIP1-207ENST00000468286 KLF15Q9UIH9 416 aa11.84□□□□□ -0.51
SGIP1-207ENST00000468286 DOLKQ9UPQ8 538 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms