RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 AEBP2Q6ZN18 517 aaPredicted RBP39.04■■■■□ 3.84
SGIP1-207ENST00000468286 CHIC1Q5VXU3 224 aa36.85■■■■□ 3.49
SGIP1-207ENST00000468286 SENP3Q9H4L4 574 aaPredicted RBP33.42■■■□□ 2.94
SGIP1-207ENST00000468286 PHF23Q9BUL5 403 aaPredicted RBP32.89■■■□□ 2.86
SGIP1-207ENST00000468286 FOXD1Q16676 465 aa31.12■■■□□ 2.57
SGIP1-207ENST00000468286 PLPPR3Q6T4P5 718 aa29.33■■■□□ 2.29
SGIP1-207ENST00000468286 MSH5O43196 834 aa29.31■■■□□ 2.28
SGIP1-207ENST00000468286 POTEDQ86YR6 584 aa29.01■■■□□ 2.23
SGIP1-207ENST00000468286 PIAS4Q8N2W9 510 aaPredicted RBP29.01■■■□□ 2.23
SGIP1-207ENST00000468286 PPP6R1Q9UPN7 881 aa28.86■■■□□ 2.21
SGIP1-207ENST00000468286 ADRA2BP18089 450 aa28.73■■■□□ 2.19
SGIP1-207ENST00000468286 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
SGIP1-207ENST00000468286 MAPK8IP2Q13387 824 aaPredicted RBP26.45■■□□□ 1.82
SGIP1-207ENST00000468286 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
SGIP1-207ENST00000468286 PPP4R3CPQ6ZMV5 832 aa25.63■■□□□ 1.69
SGIP1-207ENST00000468286 HOXD11P31277 338 aaPredicted RBP25.39■■□□□ 1.66
SGIP1-207ENST00000468286 DCAF8L1A6NGE4 600 aa25.26■■□□□ 1.63
SGIP1-207ENST00000468286 CNKSR2Q8WXI2 1034 aa25.26■■□□□ 1.63
SGIP1-207ENST00000468286 CACNB1Q02641 598 aaPredicted RBP25.24■■□□□ 1.63
SGIP1-207ENST00000468286 RNF216Q9NWF9 866 aaPredicted RBP25.12■■□□□ 1.61
SGIP1-207ENST00000468286 RNF39Q9H2S5 420 aa24.96■■□□□ 1.59
SGIP1-207ENST00000468286 DNAJC5BQ9UF47 199 aa24.68■■□□□ 1.54
SGIP1-207ENST00000468286 NCBP3Q53F19 620 aaKnown RBP24.62■■□□□ 1.53
SGIP1-207ENST00000468286 C1QBPQ07021 282 aaKnown RBP24.61■■□□□ 1.53
SGIP1-207ENST00000468286 NPM3O75607 178 aaKnown RBP24.21■■□□□ 1.47
SGIP1-207ENST00000468286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.12■■□□□ 1.45
SGIP1-207ENST00000468286 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
SGIP1-207ENST00000468286 KCNA4P22459 653 aa23.46■■□□□ 1.35
SGIP1-207ENST00000468286 SPINK5Q9NQ38 1064 aaPredicted RBP23.29■■□□□ 1.32
SGIP1-207ENST00000468286 CAPN15O75808 1086 aa23.28■■□□□ 1.32
SGIP1-207ENST00000468286 DSG3P32926 999 aa23.26■■□□□ 1.31
SGIP1-207ENST00000468286 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
SGIP1-207ENST00000468286 APLP2Q06481 763 aa23■■□□□ 1.27
SGIP1-207ENST00000468286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
SGIP1-207ENST00000468286 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
SGIP1-207ENST00000468286 ZNF219Q9P2Y4 722 aaPredicted RBP22.87■■□□□ 1.25
SGIP1-207ENST00000468286 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
SGIP1-207ENST00000468286 SAMD1Q6SPF0 538 aaPredicted RBP22.74■■□□□ 1.23
SGIP1-207ENST00000468286 POTEHQ6S545 545 aa22.7■■□□□ 1.22
SGIP1-207ENST00000468286 ABCB7O75027 752 aa22.67■■□□□ 1.22
SGIP1-207ENST00000468286 MYCNP04198 464 aaPredicted RBP22.43■■□□□ 1.18
SGIP1-207ENST00000468286 RBM42Q9BTD8 480 aaKnown RBP22.25■■□□□ 1.15
SGIP1-207ENST00000468286 POLA2Q14181 598 aa22.18■■□□□ 1.14
SGIP1-207ENST00000468286 SLC4A1APQ9BWU0 796 aaKnown RBP22.11■■□□□ 1.13
SGIP1-207ENST00000468286 FOXD4L1Q9NU39 408 aa22.04■■□□□ 1.12
SGIP1-207ENST00000468286 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
SGIP1-207ENST00000468286 CHRDL2Q6WN34 429 aa21.82■■□□□ 1.08
SGIP1-207ENST00000468286 ZBTB12Q9Y330 459 aaPredicted RBP21.81■■□□□ 1.08
SGIP1-207ENST00000468286 AKT1S1Q96B36 256 aa21.67■■□□□ 1.06
SGIP1-207ENST00000468286 ZBTB22O15209 634 aa21.56■■□□□ 1.04
SGIP1-207ENST00000468286 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
SGIP1-207ENST00000468286 ATXN8OSP0DMR3 200 aa21.46■■□□□ 1.03
SGIP1-207ENST00000468286 REM2Q8IYK8 340 aaPredicted RBP21.42■■□□□ 1.02
SGIP1-207ENST00000468286 PIP4P2Q8N4L2 257 aa21.24■□□□□ 0.99
SGIP1-207ENST00000468286 PITPNM1O00562 1244 aa21.19■□□□□ 0.98
SGIP1-207ENST00000468286 SP7Q8TDD2 431 aaPredicted RBP21.16■□□□□ 0.98
SGIP1-207ENST00000468286 FXR2P51116 673 aaKnown RBP eCLIP21.1■□□□□ 0.97
SGIP1-207ENST00000468286 FBLN2P98095 1184 aa21.1■□□□□ 0.97
SGIP1-207ENST00000468286 SPDYE2BA6NHP3 402 aa21.07■□□□□ 0.96
SGIP1-207ENST00000468286 SPDYE6P0CI01 402 aa21.07■□□□□ 0.96
SGIP1-207ENST00000468286 SPDYE2Q495Y8 402 aa21.07■□□□□ 0.96
SGIP1-207ENST00000468286 HAX1O00165 279 aa20.89■□□□□ 0.93
SGIP1-207ENST00000468286 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
SGIP1-207ENST00000468286 SPDYE1Q8NFV5 336 aaPredicted RBP20.77■□□□□ 0.92
SGIP1-207ENST00000468286 SSUH2Q9Y2M2 353 aa20.77■□□□□ 0.92
SGIP1-207ENST00000468286 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
SGIP1-207ENST00000468286 CLEC11AQ9Y240 323 aa20.65■□□□□ 0.9
SGIP1-207ENST00000468286 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
SGIP1-207ENST00000468286 EVX2Q03828 476 aa20.59■□□□□ 0.89
SGIP1-207ENST00000468286 C19orf67A6NJJ6 358 aa20.43■□□□□ 0.86
SGIP1-207ENST00000468286 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
SGIP1-207ENST00000468286 PRR29P0C7W0 189 aa20.32■□□□□ 0.84
SGIP1-207ENST00000468286 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
SGIP1-207ENST00000468286 CHADLQ6NUI6 762 aa20.27■□□□□ 0.84
SGIP1-207ENST00000468286 GABBR2O75899 941 aa20.16■□□□□ 0.82
SGIP1-207ENST00000468286 FARP1Q9Y4F1 1045 aaPredicted RBP20.03■□□□□ 0.8
SGIP1-207ENST00000468286 CD44P16070 742 aaKnown RBP19.96■□□□□ 0.79
SGIP1-207ENST00000468286 CLCN6P51797 869 aa19.89■□□□□ 0.77
SGIP1-207ENST00000468286 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
SGIP1-207ENST00000468286 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
SGIP1-207ENST00000468286 LHX8Q68G74 356 aa19.82■□□□□ 0.76
SGIP1-207ENST00000468286 CREBZFQ9NS37 354 aa19.77■□□□□ 0.76
SGIP1-207ENST00000468286 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
SGIP1-207ENST00000468286 POTEIP0CG38 1075 aa19.72■□□□□ 0.75
SGIP1-207ENST00000468286 ZNF579Q8NAF0 562 aaKnown RBP19.69■□□□□ 0.74
SGIP1-207ENST00000468286 ZRANB1Q9UGI0 708 aa19.62■□□□□ 0.73
SGIP1-207ENST00000468286 DCBLD2Q96PD2 775 aa19.56■□□□□ 0.72
SGIP1-207ENST00000468286 PAK3O75914 559 aaPredicted RBP19.44■□□□□ 0.7
SGIP1-207ENST00000468286 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
SGIP1-207ENST00000468286 MNX1P50219 401 aaPredicted RBP19.41■□□□□ 0.7
SGIP1-207ENST00000468286 GALR2O43603 387 aaPredicted RBP19.4■□□□□ 0.7
SGIP1-207ENST00000468286 PROM2Q8N271 834 aa19.31■□□□□ 0.68
SGIP1-207ENST00000468286 PHF12Q96QT6 1004 aa19.3■□□□□ 0.68
SGIP1-207ENST00000468286 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
SGIP1-207ENST00000468286 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
SGIP1-207ENST00000468286 ASTLQ6HA08 431 aaPredicted RBP19.05■□□□□ 0.64
SGIP1-207ENST00000468286 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
SGIP1-207ENST00000468286 MS4A3Q96HJ5 214 aa19.05■□□□□ 0.64
SGIP1-207ENST00000468286 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
SGIP1-207ENST00000468286 ATMINO43313 823 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms