RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 NMRK2Q9NPI5 230 aa18.98■□□□□ 0.63
RPP40-204ENST00000468105 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
RPP40-204ENST00000468105 KDRP35968 1356 aa18.96■□□□□ 0.63
RPP40-204ENST00000468105 KIF24Q5T7B8 1368 aa18.96■□□□□ 0.63
RPP40-204ENST00000468105 ATP6V1AP38606 617 aa18.96■□□□□ 0.63
RPP40-204ENST00000468105 BRCA1P38398 1863 aaKnown RBP18.95■□□□□ 0.62
RPP40-204ENST00000468105 C10orf71Q711Q0 1435 aa18.95■□□□□ 0.62
RPP40-204ENST00000468105 PHKG2P15735 406 aa18.95■□□□□ 0.62
RPP40-204ENST00000468105 KCNA3P22001 575 aa18.95■□□□□ 0.62
RPP40-204ENST00000468105 PCNTO95613 3336 aa18.95■□□□□ 0.62
RPP40-204ENST00000468105 DPEP1P16444 411 aa18.94■□□□□ 0.62
RPP40-204ENST00000468105 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
RPP40-204ENST00000468105 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
RPP40-204ENST00000468105 MYH14Q7Z406 1995 aaKnown RBP18.93■□□□□ 0.62
RPP40-204ENST00000468105 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
RPP40-204ENST00000468105 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
RPP40-204ENST00000468105 TOMM70O94826 608 aa18.92■□□□□ 0.62
RPP40-204ENST00000468105 TMF1P82094 1093 aa18.92■□□□□ 0.62
RPP40-204ENST00000468105 ARHGEF1Q92888 912 aaKnown RBP18.92■□□□□ 0.62
RPP40-204ENST00000468105 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
RPP40-204ENST00000468105 GYS1P13807 737 aa18.91■□□□□ 0.62
RPP40-204ENST00000468105 APLP1P51693 650 aa18.91■□□□□ 0.62
RPP40-204ENST00000468105 POLKQ9UBT6 870 aa18.91■□□□□ 0.62
RPP40-204ENST00000468105 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
RPP40-204ENST00000468105 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
RPP40-204ENST00000468105 TGFB2P61812 414 aa18.9■□□□□ 0.62
RPP40-204ENST00000468105 ARHGAP27Q6ZUM4 889 aa18.9■□□□□ 0.62
RPP40-204ENST00000468105 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
RPP40-204ENST00000468105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.61
RPP40-204ENST00000468105 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
RPP40-204ENST00000468105 TRAPPC3LQ5T215 181 aa18.88■□□□□ 0.61
RPP40-204ENST00000468105 COL13A1Q5TAT6 717 aaPredicted RBP18.88■□□□□ 0.61
RPP40-204ENST00000468105 IFNL2Q8IZJ0 200 aa18.88■□□□□ 0.61
RPP40-204ENST00000468105 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
RPP40-204ENST00000468105 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
RPP40-204ENST00000468105 FCHSD2O94868 740 aa18.86■□□□□ 0.61
RPP40-204ENST00000468105 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
RPP40-204ENST00000468105 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
RPP40-204ENST00000468105 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
RPP40-204ENST00000468105 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
RPP40-204ENST00000468105 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
RPP40-204ENST00000468105 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
RPP40-204ENST00000468105 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
RPP40-204ENST00000468105 DDR1Q08345 913 aa18.85■□□□□ 0.61
RPP40-204ENST00000468105 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
RPP40-204ENST00000468105 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
RPP40-204ENST00000468105 RPS6KA4O75676 772 aa18.84■□□□□ 0.61
RPP40-204ENST00000468105 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
RPP40-204ENST00000468105 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
RPP40-204ENST00000468105 CNTNAP4Q9C0A0 1308 aa18.83■□□□□ 0.61
RPP40-204ENST00000468105 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
RPP40-204ENST00000468105 PRELPP51888 382 aa18.83■□□□□ 0.6
RPP40-204ENST00000468105 FKBP8Q14318 412 aa18.83■□□□□ 0.6
RPP40-204ENST00000468105 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
RPP40-204ENST00000468105 CHRNA5P30532 468 aa18.82■□□□□ 0.6
RPP40-204ENST00000468105 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
RPP40-204ENST00000468105 RBM46Q8TBY0 533 aaKnown RBP18.82■□□□□ 0.6
RPP40-204ENST00000468105 DCAF5Q96JK2 942 aa18.82■□□□□ 0.6
RPP40-204ENST00000468105 SBF1O95248 1867 aa18.82■□□□□ 0.6
RPP40-204ENST00000468105 JMYQ8N9B5 988 aa18.81■□□□□ 0.6
RPP40-204ENST00000468105 KLRG1Q96E93 195 aa18.81■□□□□ 0.6
RPP40-204ENST00000468105 CCDC87Q9NVE4 849 aa18.81■□□□□ 0.6
RPP40-204ENST00000468105 TJP1Q07157 1748 aa18.8■□□□□ 0.6
RPP40-204ENST00000468105 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
RPP40-204ENST00000468105 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
RPP40-204ENST00000468105 ADRA2BP18089 450 aa18.79■□□□□ 0.6
RPP40-204ENST00000468105 RFC4P35249 363 aa18.79■□□□□ 0.6
RPP40-204ENST00000468105 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
RPP40-204ENST00000468105 PARP3Q9Y6F1 533 aa18.79■□□□□ 0.6
RPP40-204ENST00000468105 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
RPP40-204ENST00000468105 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.6
RPP40-204ENST00000468105 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
RPP40-204ENST00000468105 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
RPP40-204ENST00000468105 RNF181Q9P0P0 153 aa18.77■□□□□ 0.6
RPP40-204ENST00000468105 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
RPP40-204ENST00000468105 RASSF7Q02833 373 aa18.76■□□□□ 0.59
RPP40-204ENST00000468105 POLRMTO00411 1230 aaKnown RBP18.75■□□□□ 0.59
RPP40-204ENST00000468105 CAPN15O75808 1086 aa18.75■□□□□ 0.59
RPP40-204ENST00000468105 TM4SF1P30408 202 aa18.75■□□□□ 0.59
RPP40-204ENST00000468105 NFATC2IPQ8NCF5 419 aa18.75■□□□□ 0.59
RPP40-204ENST00000468105 CABP4P57796 275 aa18.74■□□□□ 0.59
RPP40-204ENST00000468105 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
RPP40-204ENST00000468105 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
RPP40-204ENST00000468105 ZNF530Q6P9A1 599 aaPredicted RBP18.74■□□□□ 0.59
RPP40-204ENST00000468105 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
RPP40-204ENST00000468105 FSTL1Q12841 308 aa18.73■□□□□ 0.59
RPP40-204ENST00000468105 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
RPP40-204ENST00000468105 TNRC6CQ9HCJ0 1690 aaKnown RBP18.71■□□□□ 0.59
RPP40-204ENST00000468105 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
RPP40-204ENST00000468105 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
RPP40-204ENST00000468105 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
RPP40-204ENST00000468105 BCL2L12Q9HB09 334 aa18.71■□□□□ 0.59
RPP40-204ENST00000468105 POTECB2RU33 542 aa18.7■□□□□ 0.58
RPP40-204ENST00000468105 MTHFSP49914 203 aa18.7■□□□□ 0.58
RPP40-204ENST00000468105 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
RPP40-204ENST00000468105 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
RPP40-204ENST00000468105 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
RPP40-204ENST00000468105 CARMIL3Q8ND23 1372 aa18.68■□□□□ 0.58
RPP40-204ENST00000468105 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
RPP40-204ENST00000468105 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms