RNA–Protein interactions for RNA: ENST00000468080.1

GPM6B-206, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-206ENST00000468080 KCNA3P22001 575 aa17.51■□□□□ 0.39
GPM6B-206ENST00000468080 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
GPM6B-206ENST00000468080 KCPQ6ZWJ8 1503 aa17.51■□□□□ 0.39
GPM6B-206ENST00000468080 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
GPM6B-206ENST00000468080 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
GPM6B-206ENST00000468080 TMF1P82094 1093 aa17.5■□□□□ 0.39
GPM6B-206ENST00000468080 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
GPM6B-206ENST00000468080 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
GPM6B-206ENST00000468080 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
GPM6B-206ENST00000468080 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
GPM6B-206ENST00000468080 FYB1O15117 783 aa17.48■□□□□ 0.39
GPM6B-206ENST00000468080 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
GPM6B-206ENST00000468080 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
GPM6B-206ENST00000468080 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
GPM6B-206ENST00000468080 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
GPM6B-206ENST00000468080 INSRP06213 1382 aa17.48■□□□□ 0.39
GPM6B-206ENST00000468080 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
GPM6B-206ENST00000468080 PCNTO95613 3336 aa17.47■□□□□ 0.39
GPM6B-206ENST00000468080 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
GPM6B-206ENST00000468080 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
GPM6B-206ENST00000468080 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
GPM6B-206ENST00000468080 GYS1P13807 737 aa17.46■□□□□ 0.39
GPM6B-206ENST00000468080 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
GPM6B-206ENST00000468080 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
GPM6B-206ENST00000468080 ATG3Q9NT62 314 aa17.46■□□□□ 0.39
GPM6B-206ENST00000468080 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
GPM6B-206ENST00000468080 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
GPM6B-206ENST00000468080 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
GPM6B-206ENST00000468080 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
GPM6B-206ENST00000468080 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
GPM6B-206ENST00000468080 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
GPM6B-206ENST00000468080 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
GPM6B-206ENST00000468080 DALRD3Q5D0E6 543 aaKnown RBP17.43■□□□□ 0.38
GPM6B-206ENST00000468080 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
GPM6B-206ENST00000468080 TESK2Q96S53 571 aa17.43■□□□□ 0.38
GPM6B-206ENST00000468080 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
GPM6B-206ENST00000468080 FLT4P35916 1363 aa17.42■□□□□ 0.38
GPM6B-206ENST00000468080 SBF1O95248 1867 aa17.41■□□□□ 0.38
GPM6B-206ENST00000468080 TNRC6CQ9HCJ0 1690 aaKnown RBP17.4■□□□□ 0.38
GPM6B-206ENST00000468080 CHRNA5P30532 468 aa17.4■□□□□ 0.38
GPM6B-206ENST00000468080 RFC4P35249 363 aa17.4■□□□□ 0.38
GPM6B-206ENST00000468080 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
GPM6B-206ENST00000468080 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
GPM6B-206ENST00000468080 RPS6KA4O75676 772 aa17.39■□□□□ 0.37
GPM6B-206ENST00000468080 PHKG2P15735 406 aa17.39■□□□□ 0.37
GPM6B-206ENST00000468080 ADRA2BP18089 450 aa17.39■□□□□ 0.37
GPM6B-206ENST00000468080 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
GPM6B-206ENST00000468080 KDRP35968 1356 aa17.39■□□□□ 0.37
GPM6B-206ENST00000468080 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
GPM6B-206ENST00000468080 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
GPM6B-206ENST00000468080 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
GPM6B-206ENST00000468080 DDR1Q08345 913 aa17.37■□□□□ 0.37
GPM6B-206ENST00000468080 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
GPM6B-206ENST00000468080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
GPM6B-206ENST00000468080 SLC34A2O95436 690 aa17.36■□□□□ 0.37
GPM6B-206ENST00000468080 VEGFAP15692 232 aaPredicted RBP17.36■□□□□ 0.37
GPM6B-206ENST00000468080 RASSF7Q02833 373 aa17.36■□□□□ 0.37
GPM6B-206ENST00000468080 EYA1Q99502 592 aa17.36■□□□□ 0.37
GPM6B-206ENST00000468080 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
GPM6B-206ENST00000468080 MYH14Q7Z406 1995 aaKnown RBP17.35■□□□□ 0.37
GPM6B-206ENST00000468080 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
GPM6B-206ENST00000468080 FKBP8Q14318 412 aa17.35■□□□□ 0.37
GPM6B-206ENST00000468080 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
GPM6B-206ENST00000468080 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
GPM6B-206ENST00000468080 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
GPM6B-206ENST00000468080 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.36
GPM6B-206ENST00000468080 POTECB2RU33 542 aa17.32■□□□□ 0.36
GPM6B-206ENST00000468080 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
GPM6B-206ENST00000468080 ZNF831Q5JPB2 1677 aa17.31■□□□□ 0.36
GPM6B-206ENST00000468080 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
GPM6B-206ENST00000468080 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
GPM6B-206ENST00000468080 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
GPM6B-206ENST00000468080 ZC3H4Q9UPT8 1303 aaKnown RBP17.3■□□□□ 0.36
GPM6B-206ENST00000468080 ERVV-2B6SEH9 535 aa17.3■□□□□ 0.36
GPM6B-206ENST00000468080 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
GPM6B-206ENST00000468080 LMNB1P20700 586 aa17.3■□□□□ 0.36
GPM6B-206ENST00000468080 TM4SF1P30408 202 aa17.3■□□□□ 0.36
GPM6B-206ENST00000468080 MKRN1Q9UHC7 482 aaKnown RBP17.3■□□□□ 0.36
GPM6B-206ENST00000468080 FOXN1O15353 648 aa17.29■□□□□ 0.36
GPM6B-206ENST00000468080 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
GPM6B-206ENST00000468080 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
GPM6B-206ENST00000468080 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
GPM6B-206ENST00000468080 SLC24A1O60721 1099 aa17.27■□□□□ 0.36
GPM6B-206ENST00000468080 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.35
GPM6B-206ENST00000468080 CABP4P57796 275 aa17.26■□□□□ 0.35
GPM6B-206ENST00000468080 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
GPM6B-206ENST00000468080 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
GPM6B-206ENST00000468080 USPL1Q5W0Q7 1092 aa17.24■□□□□ 0.35
GPM6B-206ENST00000468080 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
GPM6B-206ENST00000468080 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
GPM6B-206ENST00000468080 NFKBIEO00221 500 aa17.23■□□□□ 0.35
GPM6B-206ENST00000468080 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
GPM6B-206ENST00000468080 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
GPM6B-206ENST00000468080 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
GPM6B-206ENST00000468080 TIAM2Q8IVF5 1701 aa17.22■□□□□ 0.35
GPM6B-206ENST00000468080 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
GPM6B-206ENST00000468080 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
GPM6B-206ENST00000468080 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
GPM6B-206ENST00000468080 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
GPM6B-206ENST00000468080 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms