RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 PLIN1O60240 522 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 VAMP4O75379 141 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
NOD1-207ENST00000467706 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 BARGINQ6ZT62 677 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 SMC4Q9NTJ3 1288 aa15.72■□□□□ 0.11
NOD1-207ENST00000467706 EXOC5O00471 708 aa15.71■□□□□ 0.11
NOD1-207ENST00000467706 NKX1-1Q15270 411 aaPredicted RBP15.71■□□□□ 0.11
NOD1-207ENST00000467706 SSH1Q8WYL5 1049 aa15.71■□□□□ 0.11
NOD1-207ENST00000467706 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
NOD1-207ENST00000467706 AFF2P51816 1311 aa15.7■□□□□ 0.1
NOD1-207ENST00000467706 CABP4P57796 275 aa15.7■□□□□ 0.1
NOD1-207ENST00000467706 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
NOD1-207ENST00000467706 DDB1Q16531 1140 aa15.69■□□□□ 0.1
NOD1-207ENST00000467706 ERICH6BQ5W0A0 696 aa15.69■□□□□ 0.1
NOD1-207ENST00000467706 FRAT1Q92837 279 aaPredicted RBP15.69■□□□□ 0.1
NOD1-207ENST00000467706 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
NOD1-207ENST00000467706 ERVV-2B6SEH9 535 aa15.68■□□□□ 0.1
NOD1-207ENST00000467706 NFATC2IPQ8NCF5 419 aa15.68■□□□□ 0.1
NOD1-207ENST00000467706 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
NOD1-207ENST00000467706 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
NOD1-207ENST00000467706 EIF4A1P60842 406 aaKnown RBP15.67■□□□□ 0.1
NOD1-207ENST00000467706 KCNQ3O43525 872 aa15.66■□□□□ 0.1
NOD1-207ENST00000467706 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
NOD1-207ENST00000467706 ZKSCAN2Q63HK3 967 aa15.66■□□□□ 0.1
NOD1-207ENST00000467706 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
NOD1-207ENST00000467706 ATRNO75882 1429 aa15.66■□□□□ 0.1
NOD1-207ENST00000467706 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
NOD1-207ENST00000467706 BRPF1P55201 1214 aaPredicted RBP15.65■□□□□ 0.1
NOD1-207ENST00000467706 C20orf194Q5TEA3 1177 aa15.65■□□□□ 0.1
NOD1-207ENST00000467706 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
NOD1-207ENST00000467706 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
NOD1-207ENST00000467706 GLI3P10071 1580 aa15.65■□□□□ 0.1
NOD1-207ENST00000467706 IPO8O15397 1037 aaKnown RBP15.64■□□□□ 0.09
NOD1-207ENST00000467706 HOXB7P09629 217 aa15.64■□□□□ 0.09
NOD1-207ENST00000467706 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
NOD1-207ENST00000467706 FBXO41Q8TF61 875 aa15.64■□□□□ 0.09
NOD1-207ENST00000467706 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
NOD1-207ENST00000467706 PAPPAQ13219 1627 aa15.64■□□□□ 0.09
NOD1-207ENST00000467706 THSD7AQ9UPZ6 1657 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 A0A0G2JS52 829 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 MS4A1P11836 297 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 MYT1Q01538 1121 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 SLC39A6Q13433 755 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 GJD4Q96KN9 370 aaPredicted RBP15.63■□□□□ 0.09
NOD1-207ENST00000467706 CRBNQ96SW2 442 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 NOB1Q9ULX3 412 aaKnown RBP15.63■□□□□ 0.09
NOD1-207ENST00000467706 DOT1LQ8TEK3 1739 aa15.63■□□□□ 0.09
NOD1-207ENST00000467706 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
NOD1-207ENST00000467706 CCDC30Q5VVM6 783 aa15.62■□□□□ 0.09
NOD1-207ENST00000467706 EXOC6Q8TAG9 804 aa15.62■□□□□ 0.09
NOD1-207ENST00000467706 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
NOD1-207ENST00000467706 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
NOD1-207ENST00000467706 ITGB4P16144 1822 aa15.61■□□□□ 0.09
NOD1-207ENST00000467706 ATF7IPQ6VMQ6 1270 aa15.61■□□□□ 0.09
NOD1-207ENST00000467706 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
NOD1-207ENST00000467706 MARCH10Q8NA82 808 aaPredicted RBP15.61■□□□□ 0.09
NOD1-207ENST00000467706 UBR2Q8IWV8 1755 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
NOD1-207ENST00000467706 TRIM27P14373 513 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 DZIP1LQ8IYY4 767 aaKnown RBP15.6■□□□□ 0.09
NOD1-207ENST00000467706 PANK1Q8TE04 598 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 ARHGAP45Q92619 1136 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 FMNL2Q96PY5 1086 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
NOD1-207ENST00000467706 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 C5P01031 1676 aa15.6■□□□□ 0.09
NOD1-207ENST00000467706 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
NOD1-207ENST00000467706 EIF2S2P20042 333 aaKnown RBP15.59■□□□□ 0.09
NOD1-207ENST00000467706 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
NOD1-207ENST00000467706 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
NOD1-207ENST00000467706 SYTL4Q96C24 671 aaPredicted RBP15.58■□□□□ 0.08
NOD1-207ENST00000467706 API5Q9BZZ5 524 aaKnown RBP15.58■□□□□ 0.08
NOD1-207ENST00000467706 PTPRCP08575 1304 aa15.58■□□□□ 0.08
NOD1-207ENST00000467706 CACNA1FO60840 1977 aa15.58■□□□□ 0.08
NOD1-207ENST00000467706 BCL9O00512 1426 aa15.58■□□□□ 0.08
NOD1-207ENST00000467706 KCPQ6ZWJ8 1503 aa15.58■□□□□ 0.08
NOD1-207ENST00000467706 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
NOD1-207ENST00000467706 SNRPA1P09661 255 aaKnown RBP15.57■□□□□ 0.08
NOD1-207ENST00000467706 RLBP1P12271 317 aa15.57■□□□□ 0.08
NOD1-207ENST00000467706 ZNF772Q68DY9 489 aaPredicted RBP15.57■□□□□ 0.08
NOD1-207ENST00000467706 PIGBQ92521 554 aa15.57■□□□□ 0.08
NOD1-207ENST00000467706 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
NOD1-207ENST00000467706 PRIM1P49642 420 aaKnown RBP15.56■□□□□ 0.08
NOD1-207ENST00000467706 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
NOD1-207ENST00000467706 ONECUT3O60422 494 aaPredicted RBP15.55■□□□□ 0.08
NOD1-207ENST00000467706 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
NOD1-207ENST00000467706 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
NOD1-207ENST00000467706 ABCC4O15439 1325 aa15.54■□□□□ 0.08
NOD1-207ENST00000467706 MVPQ14764 893 aaKnown RBP15.54■□□□□ 0.08
NOD1-207ENST00000467706 G2E3Q7L622 706 aa15.54■□□□□ 0.08
NOD1-207ENST00000467706 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
NOD1-207ENST00000467706 ATG3Q9NT62 314 aa15.54■□□□□ 0.08
NOD1-207ENST00000467706 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
NOD1-207ENST00000467706 ASAP1Q9ULH1 1129 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms