RNA–Protein interactions for RNA: ENST00000467439.1

RPSAP39-201, Transcript of ribosomal protein SA pseudogene 39, humanhuman

BASIC

Gene RPSAP39, Length 883 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP39-201ENST00000467439 ADGRL3Q9HAR2 1447 aa8.85□□□□□ -0.99
RPSAP39-201ENST00000467439 LAMC1P11047 1609 aa8.84□□□□□ -0.99
RPSAP39-201ENST00000467439 FDX1P10109 184 aa8.84□□□□□ -0.99
RPSAP39-201ENST00000467439 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
RPSAP39-201ENST00000467439 TATDN2Q93075 761 aa8.84□□□□□ -0.99
RPSAP39-201ENST00000467439 USP21Q9UK80 565 aa8.84□□□□□ -0.99
RPSAP39-201ENST00000467439 NBPF26B4DH59 902 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 E9PSI1 815 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 HOXA2O43364 376 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 USP46P62068 366 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 ARSIQ5FYB1 569 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 PNMA3Q9UL41 463 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
RPSAP39-201ENST00000467439 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 METP08581 1390 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 EP400Q96L91 3159 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
RPSAP39-201ENST00000467439 GCGRP47871 477 aa8.82□□□□□ -1
RPSAP39-201ENST00000467439 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
RPSAP39-201ENST00000467439 TFIP11Q9UBB9 837 aaKnown RBP8.82□□□□□ -1
RPSAP39-201ENST00000467439 C1orf167Q5SNV9 1468 aa8.82□□□□□ -1
RPSAP39-201ENST00000467439 PTCH1Q13635 1447 aa8.81□□□□□ -1
RPSAP39-201ENST00000467439 MARF1Q9Y4F3 1742 aaKnown RBP8.81□□□□□ -1
RPSAP39-201ENST00000467439 CCDC27Q2M243 656 aa8.81□□□□□ -1
RPSAP39-201ENST00000467439 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
RPSAP39-201ENST00000467439 CCDC125Q86Z20 511 aa8.81□□□□□ -1
RPSAP39-201ENST00000467439 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
RPSAP39-201ENST00000467439 UCN2Q96RP3 112 aa8.81□□□□□ -1
RPSAP39-201ENST00000467439 ATRNO75882 1429 aa8.8□□□□□ -1
RPSAP39-201ENST00000467439 COL22A1Q8NFW1 1626 aaPredicted RBP8.8□□□□□ -1
RPSAP39-201ENST00000467439 PACS2Q86VP3 889 aa8.8□□□□□ -1
RPSAP39-201ENST00000467439 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
RPSAP39-201ENST00000467439 NUP155O75694 1391 aa8.8□□□□□ -1
RPSAP39-201ENST00000467439 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
RPSAP39-201ENST00000467439 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 IGSF3O75054 1194 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 ATG7O95352 703 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 GUCA2AQ02747 115 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 CDCA8Q53HL2 280 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 SND1Q7KZF4 910 aaKnown RBP eCLIP8.79□□□□□ -1
RPSAP39-201ENST00000467439 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
RPSAP39-201ENST00000467439 PRR7Q8TB68 274 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 HLA-CQ95604 372 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 NEXMIFQ5QGS0 1516 aa8.79□□□□□ -1
RPSAP39-201ENST00000467439 ROCK1Q13464 1354 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 SMAPO00193 183 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 MTMR2Q13614 643 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 ORAI2Q96SN7 254 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 LHX6Q9UPM6 363 aa8.78□□□□□ -1
RPSAP39-201ENST00000467439 KIF1BO60333 1816 aa8.77□□□□□ -1
RPSAP39-201ENST00000467439 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 SOX11P35716 441 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 TSC1Q92574 1164 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 MYOM2P54296 1465 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 BCL9LQ86UU0 1499 aa8.77□□□□□ -1.01
RPSAP39-201ENST00000467439 CLTCL1P53675 1640 aa8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 PTPREP23469 700 aa8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 DOK7Q18PE1 504 aa8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 MAFBQ9Y5Q3 323 aaPredicted RBP8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 BLMP54132 1417 aaPredicted RBP8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 LRP5O75197 1615 aa8.76□□□□□ -1.01
RPSAP39-201ENST00000467439 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 ROBO2Q9HCK4 1378 aa8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 SLC10A3P09131 477 aa8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 HOXB3P14651 431 aaPredicted RBP8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 NPHP3Q7Z494 1330 aa8.75□□□□□ -1.01
RPSAP39-201ENST00000467439 SEMA3FQ13275 785 aa8.74□□□□□ -1.01
RPSAP39-201ENST00000467439 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
RPSAP39-201ENST00000467439 PXDNQ92626 1479 aa8.74□□□□□ -1.01
RPSAP39-201ENST00000467439 GLI3P10071 1580 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 CDC42BPGQ6DT37 1551 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 HFM1A2PYH4 1435 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 PRAG1Q86YV5 1406 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 SF3B2Q13435 895 aaKnown RBP8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 ESCO1Q5FWF5 840 aa8.73□□□□□ -1.01
RPSAP39-201ENST00000467439 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 XPCQ01831 940 aaPredicted RBP8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
RPSAP39-201ENST00000467439 SLIT2O94813 1529 aa8.71□□□□□ -1.01
RPSAP39-201ENST00000467439 C6orf229H3BNL8 230 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 RIMBP2O15034 1052 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 FOXO3O43524 673 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 ITGAEP38570 1179 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 NR6A1Q15406 480 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 UNC5CLQ8IV45 518 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 USP32Q8NFA0 1604 aa8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.02
RPSAP39-201ENST00000467439 ATP9BO43861 1147 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms