RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
C9orf135-202ENST00000466872 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
C9orf135-202ENST00000466872 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf135-202ENST00000466872 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
C9orf135-202ENST00000466872 ERBB3P21860 1342 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
C9orf135-202ENST00000466872 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
C9orf135-202ENST00000466872 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
C9orf135-202ENST00000466872 STRN4Q9NRL3 753 aa13.38□□□□□ -0.27
C9orf135-202ENST00000466872 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
C9orf135-202ENST00000466872 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
C9orf135-202ENST00000466872 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
C9orf135-202ENST00000466872 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
C9orf135-202ENST00000466872 CAMK2BQ13554 666 aa13.37□□□□□ -0.27
C9orf135-202ENST00000466872 COG3Q96JB2 828 aa13.37□□□□□ -0.27
C9orf135-202ENST00000466872 PANK3Q9H999 370 aa13.36□□□□□ -0.27
C9orf135-202ENST00000466872 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
C9orf135-202ENST00000466872 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
C9orf135-202ENST00000466872 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
C9orf135-202ENST00000466872 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
C9orf135-202ENST00000466872 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
C9orf135-202ENST00000466872 IP6K1Q92551 441 aa13.35□□□□□ -0.27
C9orf135-202ENST00000466872 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
C9orf135-202ENST00000466872 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
C9orf135-202ENST00000466872 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
C9orf135-202ENST00000466872 HOXC9P31274 260 aa13.34□□□□□ -0.27
C9orf135-202ENST00000466872 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
C9orf135-202ENST00000466872 THRAP3Q9Y2W1 955 aaKnown RBP13.34□□□□□ -0.27
C9orf135-202ENST00000466872 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
C9orf135-202ENST00000466872 NSD2O96028 1365 aa13.33□□□□□ -0.27
C9orf135-202ENST00000466872 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.27
C9orf135-202ENST00000466872 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.28
C9orf135-202ENST00000466872 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
C9orf135-202ENST00000466872 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
C9orf135-202ENST00000466872 EVA1CP58658 441 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 ANKRD24Q8TF21 1146 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
C9orf135-202ENST00000466872 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 INSRP06213 1382 aa13.32□□□□□ -0.28
C9orf135-202ENST00000466872 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
C9orf135-202ENST00000466872 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
C9orf135-202ENST00000466872 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
C9orf135-202ENST00000466872 FLT4P35916 1363 aa13.31□□□□□ -0.28
C9orf135-202ENST00000466872 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
C9orf135-202ENST00000466872 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
C9orf135-202ENST00000466872 MARVELD3Q96A59 401 aa13.3□□□□□ -0.28
C9orf135-202ENST00000466872 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
C9orf135-202ENST00000466872 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
C9orf135-202ENST00000466872 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
C9orf135-202ENST00000466872 BCL9O00512 1426 aa13.29□□□□□ -0.28
C9orf135-202ENST00000466872 MEGF6O75095 1541 aa13.29□□□□□ -0.28
C9orf135-202ENST00000466872 POTEMA6NI47 508 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 TBC1D12O60347 775 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 E2F4Q16254 413 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 RREB1Q92766 1687 aa13.28□□□□□ -0.28
C9orf135-202ENST00000466872 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.28
C9orf135-202ENST00000466872 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.28
C9orf135-202ENST00000466872 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
C9orf135-202ENST00000466872 NHSQ6T4R5 1651 aa13.27□□□□□ -0.29
C9orf135-202ENST00000466872 NUDT7P0C024 238 aa13.26□□□□□ -0.29
C9orf135-202ENST00000466872 EMP3P54852 163 aa13.26□□□□□ -0.29
C9orf135-202ENST00000466872 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
C9orf135-202ENST00000466872 AMPHP49418 695 aa13.25□□□□□ -0.29
C9orf135-202ENST00000466872 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
C9orf135-202ENST00000466872 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
C9orf135-202ENST00000466872 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
C9orf135-202ENST00000466872 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-202ENST00000466872 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
C9orf135-202ENST00000466872 CDCA7Q9BWT1 371 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-202ENST00000466872 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
C9orf135-202ENST00000466872 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 DOT1LQ8TEK3 1739 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 A0A0G2JS52 829 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 MYT1Q01538 1121 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
C9orf135-202ENST00000466872 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
C9orf135-202ENST00000466872 IL2RBP14784 551 aa13.22□□□□□ -0.29
C9orf135-202ENST00000466872 DDB1Q16531 1140 aa13.22□□□□□ -0.29
C9orf135-202ENST00000466872 BTAF1O14981 1849 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 POTEB3A0JP26 581 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 POTEBQ6S5H4 581 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
C9orf135-202ENST00000466872 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
C9orf135-202ENST00000466872 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
C9orf135-202ENST00000466872 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
C9orf135-202ENST00000466872 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
C9orf135-202ENST00000466872 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
C9orf135-202ENST00000466872 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms