RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
LINC00879-204ENST00000466560 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
LINC00879-204ENST00000466560 NCOA4Q13772 614 aa8.61□□□□□ -1.03
LINC00879-204ENST00000466560 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
LINC00879-204ENST00000466560 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
LINC00879-204ENST00000466560 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
LINC00879-204ENST00000466560 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
LINC00879-204ENST00000466560 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
LINC00879-204ENST00000466560 SV2AQ7L0J3 742 aa8.6□□□□□ -1.03
LINC00879-204ENST00000466560 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
LINC00879-204ENST00000466560 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
LINC00879-204ENST00000466560 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
LINC00879-204ENST00000466560 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
LINC00879-204ENST00000466560 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
LINC00879-204ENST00000466560 WASLO00401 505 aaPredicted RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 EML3Q32P44 896 aa8.59□□□□□ -1.03
LINC00879-204ENST00000466560 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 TAS1R3Q7RTX0 852 aa8.59□□□□□ -1.03
LINC00879-204ENST00000466560 GAS2L1Q99501 681 aaPredicted RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
LINC00879-204ENST00000466560 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
LINC00879-204ENST00000466560 DYRK1BQ9Y463 629 aa8.59□□□□□ -1.03
LINC00879-204ENST00000466560 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
LINC00879-204ENST00000466560 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
LINC00879-204ENST00000466560 SCNN1DP51172 638 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 GDF10P55107 478 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 TMEM214Q6NUQ4 689 aaKnown RBP8.58□□□□□ -1.04
LINC00879-204ENST00000466560 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 ARXQ96QS3 562 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
LINC00879-204ENST00000466560 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
LINC00879-204ENST00000466560 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
LINC00879-204ENST00000466560 PHKA2P46019 1235 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 KRT76Q01546 638 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 TLR1Q15399 786 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 WDR44Q5JSH3 913 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 CNTNAP3BQ96NU0 1288 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 CNTNAP3Q9BZ76 1288 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 TIMMDC1Q9NPL8 285 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
LINC00879-204ENST00000466560 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
LINC00879-204ENST00000466560 INHAP05111 366 aa8.56□□□□□ -1.04
LINC00879-204ENST00000466560 GNASQ5JWF2 1037 aa8.56□□□□□ -1.04
LINC00879-204ENST00000466560 PCDHGA11Q9Y5H2 935 aa8.56□□□□□ -1.04
LINC00879-204ENST00000466560 HOMEZQ8IX15 550 aa8.55□□□□□ -1.04
LINC00879-204ENST00000466560 TRIM22Q8IYM9 498 aa8.55□□□□□ -1.04
LINC00879-204ENST00000466560 ZNF837Q96EG3 531 aaPredicted RBP8.55□□□□□ -1.04
LINC00879-204ENST00000466560 SERTAD1Q9UHV2 236 aa8.55□□□□□ -1.04
LINC00879-204ENST00000466560 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
LINC00879-204ENST00000466560 GTF2IP78347 998 aa8.54□□□□□ -1.04
LINC00879-204ENST00000466560 DBN1Q16643 649 aa8.54□□□□□ -1.04
LINC00879-204ENST00000466560 C4orf17Q53FE4 359 aa8.54□□□□□ -1.04
LINC00879-204ENST00000466560 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
LINC00879-204ENST00000466560 RASA1P20936 1047 aa8.53□□□□□ -1.04
LINC00879-204ENST00000466560 PSME1Q06323 249 aa8.53□□□□□ -1.04
LINC00879-204ENST00000466560 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
LINC00879-204ENST00000466560 RHBDD1Q8TEB9 315 aa8.53□□□□□ -1.04
LINC00879-204ENST00000466560 GMCL1Q96IK5 515 aa8.53□□□□□ -1.04
LINC00879-204ENST00000466560 H7C1W4 665 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 ATG7O95352 703 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 F11P03951 625 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 SMTNP53814 917 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
LINC00879-204ENST00000466560 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
LINC00879-204ENST00000466560 TRIM50Q86XT4 487 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
LINC00879-204ENST00000466560 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
LINC00879-204ENST00000466560 FAM181BA6NEQ2 426 aa8.51□□□□□ -1.05
LINC00879-204ENST00000466560 GPR25O00155 361 aa8.51□□□□□ -1.05
LINC00879-204ENST00000466560 ZBTB7BO15156 539 aaPredicted RBP8.51□□□□□ -1.05
LINC00879-204ENST00000466560 CLDN10P78369 228 aa8.51□□□□□ -1.05
LINC00879-204ENST00000466560 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
LINC00879-204ENST00000466560 ATP1A2P50993 1020 aa8.5□□□□□ -1.05
LINC00879-204ENST00000466560 PTK7Q13308 1070 aa8.5□□□□□ -1.05
LINC00879-204ENST00000466560 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
LINC00879-204ENST00000466560 GTPBP3Q969Y2 492 aaKnown RBP8.5□□□□□ -1.05
LINC00879-204ENST00000466560 NUCKS1Q9H1E3 243 aaKnown RBP8.5□□□□□ -1.05
LINC00879-204ENST00000466560 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L11C9JVI0 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L21D6R901 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L18D6R9N7 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L22D6RA61 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L17D6RBQ6 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L19D6RCP7 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L20D6RJB6 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 PLA2G4AP47712 749 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 USP17L24Q0WX57 530 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 GAS6Q14393 721 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00879-204ENST00000466560 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
LINC00879-204ENST00000466560 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms