RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 IFNL2Q8IZJ0 200 aa11.82□□□□□ -0.52
DDR1-242ENST00000465966 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
DDR1-242ENST00000465966 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
DDR1-242ENST00000465966 ITPK1Q13572 414 aa11.81□□□□□ -0.52
DDR1-242ENST00000465966 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
DDR1-242ENST00000465966 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
DDR1-242ENST00000465966 FCHSD2O94868 740 aa11.8□□□□□ -0.52
DDR1-242ENST00000465966 ADRA2BP18089 450 aa11.8□□□□□ -0.52
DDR1-242ENST00000465966 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
DDR1-242ENST00000465966 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
DDR1-242ENST00000465966 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
DDR1-242ENST00000465966 PHKG2P15735 406 aa11.79□□□□□ -0.52
DDR1-242ENST00000465966 RFC4P35249 363 aa11.79□□□□□ -0.52
DDR1-242ENST00000465966 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
DDR1-242ENST00000465966 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
DDR1-242ENST00000465966 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
DDR1-242ENST00000465966 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
DDR1-242ENST00000465966 DPEP1P16444 411 aa11.78□□□□□ -0.52
DDR1-242ENST00000465966 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
DDR1-242ENST00000465966 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
DDR1-242ENST00000465966 EYA1Q99502 592 aa11.78□□□□□ -0.52
DDR1-242ENST00000465966 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
DDR1-242ENST00000465966 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.52
DDR1-242ENST00000465966 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
DDR1-242ENST00000465966 FSTL1Q12841 308 aa11.77□□□□□ -0.53
DDR1-242ENST00000465966 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
DDR1-242ENST00000465966 DIEXFQ68CQ4 756 aaKnown RBP11.77□□□□□ -0.53
DDR1-242ENST00000465966 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
DDR1-242ENST00000465966 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
DDR1-242ENST00000465966 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
DDR1-242ENST00000465966 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 GYS1P13807 737 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 DCAF5Q96JK2 942 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 PLEKHG2Q9H7P9 1386 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 NCAPD2Q15021 1401 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
DDR1-242ENST00000465966 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
DDR1-242ENST00000465966 CNTNAP4Q9C0A0 1308 aa11.75□□□□□ -0.53
DDR1-242ENST00000465966 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
DDR1-242ENST00000465966 TAF1LQ8IZX4 1826 aa11.74□□□□□ -0.53
DDR1-242ENST00000465966 CABP4P57796 275 aa11.74□□□□□ -0.53
DDR1-242ENST00000465966 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
DDR1-242ENST00000465966 KCNA3P22001 575 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 KDRP35968 1356 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
DDR1-242ENST00000465966 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
DDR1-242ENST00000465966 AMOTQ4VCS5 1084 aa11.72□□□□□ -0.53
DDR1-242ENST00000465966 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
DDR1-242ENST00000465966 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
DDR1-242ENST00000465966 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
DDR1-242ENST00000465966 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
DDR1-242ENST00000465966 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
DDR1-242ENST00000465966 HTRA3P83110 453 aa11.71□□□□□ -0.53
DDR1-242ENST00000465966 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
DDR1-242ENST00000465966 CAPN15O75808 1086 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
DDR1-242ENST00000465966 MTHFSP49914 203 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
DDR1-242ENST00000465966 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 MAP2P11137 1827 aaKnown RBP11.7□□□□□ -0.54
DDR1-242ENST00000465966 ITGB4P16144 1822 aa11.7□□□□□ -0.54
DDR1-242ENST00000465966 ZPR1O75312 459 aa11.69□□□□□ -0.54
DDR1-242ENST00000465966 CRKLP46109 303 aaKnown RBP11.69□□□□□ -0.54
DDR1-242ENST00000465966 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
DDR1-242ENST00000465966 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
DDR1-242ENST00000465966 CHRNA5P30532 468 aa11.68□□□□□ -0.54
DDR1-242ENST00000465966 DDX10Q13206 875 aaKnown RBP11.68□□□□□ -0.54
DDR1-242ENST00000465966 FKBP8Q14318 412 aa11.68□□□□□ -0.54
DDR1-242ENST00000465966 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
DDR1-242ENST00000465966 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
DDR1-242ENST00000465966 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
DDR1-242ENST00000465966 PRELPP51888 382 aa11.67□□□□□ -0.54
DDR1-242ENST00000465966 DDR1Q08345 913 aa11.67□□□□□ -0.54
DDR1-242ENST00000465966 NFATC2IPQ8NCF5 419 aa11.67□□□□□ -0.54
DDR1-242ENST00000465966 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
DDR1-242ENST00000465966 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
DDR1-242ENST00000465966 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
DDR1-242ENST00000465966 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
DDR1-242ENST00000465966 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
DDR1-242ENST00000465966 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
DDR1-242ENST00000465966 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
DDR1-242ENST00000465966 LMNB1P20700 586 aa11.65□□□□□ -0.54
DDR1-242ENST00000465966 TM4SF1P30408 202 aa11.65□□□□□ -0.54
DDR1-242ENST00000465966 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
DDR1-242ENST00000465966 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
DDR1-242ENST00000465966 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
DDR1-242ENST00000465966 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
DDR1-242ENST00000465966 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
DDR1-242ENST00000465966 ZNF831Q5JPB2 1677 aa11.63□□□□□ -0.55
DDR1-242ENST00000465966 RASSF7Q02833 373 aa11.63□□□□□ -0.55
DDR1-242ENST00000465966 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
DDR1-242ENST00000465966 TTLL6Q8N841 843 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 402.4 ms