RNA–Protein interactions for RNA: ENST00000465905.5

TRAPPC10-206, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-206ENST00000465905 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
TRAPPC10-206ENST00000465905 KDRP35968 1356 aa17.33■□□□□ 0.36
TRAPPC10-206ENST00000465905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
TRAPPC10-206ENST00000465905 C4BP0C0L5 1744 aa17.33■□□□□ 0.36
TRAPPC10-206ENST00000465905 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
TRAPPC10-206ENST00000465905 GNPATO15228 680 aa17.32■□□□□ 0.36
TRAPPC10-206ENST00000465905 ITPK1Q13572 414 aa17.32■□□□□ 0.36
TRAPPC10-206ENST00000465905 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
TRAPPC10-206ENST00000465905 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
TRAPPC10-206ENST00000465905 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
TRAPPC10-206ENST00000465905 NLGN2Q8NFZ4 835 aa17.3■□□□□ 0.36
TRAPPC10-206ENST00000465905 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC10-206ENST00000465905 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
TRAPPC10-206ENST00000465905 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
TRAPPC10-206ENST00000465905 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
TRAPPC10-206ENST00000465905 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
TRAPPC10-206ENST00000465905 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
TRAPPC10-206ENST00000465905 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
TRAPPC10-206ENST00000465905 HMOX1P09601 288 aa17.27■□□□□ 0.36
TRAPPC10-206ENST00000465905 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
TRAPPC10-206ENST00000465905 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
TRAPPC10-206ENST00000465905 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
TRAPPC10-206ENST00000465905 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
TRAPPC10-206ENST00000465905 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC10-206ENST00000465905 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
TRAPPC10-206ENST00000465905 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
TRAPPC10-206ENST00000465905 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
TRAPPC10-206ENST00000465905 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
TRAPPC10-206ENST00000465905 ADRA2BP18089 450 aa17.25■□□□□ 0.35
TRAPPC10-206ENST00000465905 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
TRAPPC10-206ENST00000465905 ZNF784Q8NCA9 323 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC10-206ENST00000465905 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
TRAPPC10-206ENST00000465905 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
TRAPPC10-206ENST00000465905 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
TRAPPC10-206ENST00000465905 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
TRAPPC10-206ENST00000465905 RFC4P35249 363 aa17.22■□□□□ 0.35
TRAPPC10-206ENST00000465905 NLGN1Q8N2Q7 840 aa17.22■□□□□ 0.35
TRAPPC10-206ENST00000465905 ZNF831Q5JPB2 1677 aa17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 MMP10P09238 476 aa17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
TRAPPC10-206ENST00000465905 CHD4Q14839 1912 aa17.2■□□□□ 0.34
TRAPPC10-206ENST00000465905 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
TRAPPC10-206ENST00000465905 CRKLP46109 303 aaKnown RBP17.19■□□□□ 0.34
TRAPPC10-206ENST00000465905 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
TRAPPC10-206ENST00000465905 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
TRAPPC10-206ENST00000465905 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC10-206ENST00000465905 SCN11AQ9UI33 1791 aa17.16■□□□□ 0.34
TRAPPC10-206ENST00000465905 GYS1P13807 737 aa17.16■□□□□ 0.34
TRAPPC10-206ENST00000465905 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
TRAPPC10-206ENST00000465905 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
TRAPPC10-206ENST00000465905 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
TRAPPC10-206ENST00000465905 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
TRAPPC10-206ENST00000465905 MRC1P22897 1456 aa17.15■□□□□ 0.34
TRAPPC10-206ENST00000465905 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC10-206ENST00000465905 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
TRAPPC10-206ENST00000465905 TGFB2P61812 414 aa17.14■□□□□ 0.33
TRAPPC10-206ENST00000465905 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
TRAPPC10-206ENST00000465905 TEFQ10587 303 aa17.13■□□□□ 0.33
TRAPPC10-206ENST00000465905 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
TRAPPC10-206ENST00000465905 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
TRAPPC10-206ENST00000465905 ZPR1O75312 459 aa17.12■□□□□ 0.33
TRAPPC10-206ENST00000465905 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
TRAPPC10-206ENST00000465905 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
TRAPPC10-206ENST00000465905 USP42Q9H9J4 1324 aaKnown RBP17.12■□□□□ 0.33
TRAPPC10-206ENST00000465905 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC10-206ENST00000465905 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
TRAPPC10-206ENST00000465905 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
TRAPPC10-206ENST00000465905 MYH14Q7Z406 1995 aaKnown RBP17.11■□□□□ 0.33
TRAPPC10-206ENST00000465905 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC10-206ENST00000465905 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC10-206ENST00000465905 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
TRAPPC10-206ENST00000465905 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC10-206ENST00000465905 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC10-206ENST00000465905 STARD3NLO95772 234 aa17.09■□□□□ 0.33
TRAPPC10-206ENST00000465905 FKBP8Q14318 412 aa17.09■□□□□ 0.33
TRAPPC10-206ENST00000465905 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
TRAPPC10-206ENST00000465905 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
TRAPPC10-206ENST00000465905 TJP1Q07157 1748 aa17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC10-206ENST00000465905 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 FCHSD2O94868 740 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 BCS1LQ9Y276 419 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
TRAPPC10-206ENST00000465905 DPEP1P16444 411 aa17.06■□□□□ 0.32
TRAPPC10-206ENST00000465905 C1QTNF8P60827 252 aa17.06■□□□□ 0.32
TRAPPC10-206ENST00000465905 RTF1Q92541 710 aaKnown RBP17.06■□□□□ 0.32
TRAPPC10-206ENST00000465905 NARFQ9UHQ1 456 aa17.06■□□□□ 0.32
TRAPPC10-206ENST00000465905 C4AP0C0L4 1744 aa17.06■□□□□ 0.32
TRAPPC10-206ENST00000465905 UTRNP46939 3433 aa17.05■□□□□ 0.32
TRAPPC10-206ENST00000465905 COL15A1P39059 1388 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms