RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 MAP7D1Q3KQU3 841 aa6.62□□□□□ -1.35
SNX4-202ENST00000465505 C4orf17Q53FE4 359 aa6.62□□□□□ -1.35
SNX4-202ENST00000465505 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
SNX4-202ENST00000465505 TMEM214Q6NUQ4 689 aaKnown RBP6.62□□□□□ -1.35
SNX4-202ENST00000465505 SIRT1Q96EB6 747 aa6.62□□□□□ -1.35
SNX4-202ENST00000465505 TRERF1Q96PN7 1200 aa6.62□□□□□ -1.35
SNX4-202ENST00000465505 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 RNF225M0QZC1 329 aaPredicted RBP6.61□□□□□ -1.35
SNX4-202ENST00000465505 SOX11P35716 441 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 MARSP56192 900 aaKnown RBP6.61□□□□□ -1.35
SNX4-202ENST00000465505 SEMA3FQ13275 785 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 UBAP2LQ14157 1087 aaKnown RBP6.61□□□□□ -1.35
SNX4-202ENST00000465505 GNASQ5JWF2 1037 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 PPARGC1BQ86YN6 1023 aaKnown RBP6.61□□□□□ -1.35
SNX4-202ENST00000465505 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 ACDQ96AP0 544 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 GPAMQ9HCL2 828 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 COG6Q9Y2V7 657 aa6.61□□□□□ -1.35
SNX4-202ENST00000465505 MX2P20592 715 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 IRS1P35568 1242 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 SCNN1DP51172 638 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 PLPP7Q8NBV4 271 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
SNX4-202ENST00000465505 INHAP05111 366 aa6.59□□□□□ -1.35
SNX4-202ENST00000465505 BCRP11274 1271 aa6.59□□□□□ -1.35
SNX4-202ENST00000465505 MSX1P28360 303 aa6.59□□□□□ -1.35
SNX4-202ENST00000465505 GTF2E1P29083 439 aaPredicted RBP6.59□□□□□ -1.35
SNX4-202ENST00000465505 RHBDD1Q8TEB9 315 aa6.59□□□□□ -1.35
SNX4-202ENST00000465505 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
SNX4-202ENST00000465505 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
SNX4-202ENST00000465505 GDF10P55107 478 aa6.58□□□□□ -1.36
SNX4-202ENST00000465505 LBRQ14739 615 aaKnown RBP6.58□□□□□ -1.36
SNX4-202ENST00000465505 TLR1Q15399 786 aa6.58□□□□□ -1.36
SNX4-202ENST00000465505 ALG2Q9H553 416 aa6.58□□□□□ -1.36
SNX4-202ENST00000465505 RUBCNLQ9H714 662 aa6.58□□□□□ -1.36
SNX4-202ENST00000465505 PIK3CDO00329 1044 aa6.57□□□□□ -1.36
SNX4-202ENST00000465505 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
SNX4-202ENST00000465505 LRRC4BQ9NT99 713 aa6.57□□□□□ -1.36
SNX4-202ENST00000465505 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
SNX4-202ENST00000465505 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 CSB-PGBD3P0DP91 1061 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 SMTNP53814 917 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 PGBD3Q8N328 593 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 SLC4A9Q96Q91 983 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 CRISPLD1Q9H336 500 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 NDFIP2Q9NV92 336 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 PHF24Q9UPV7 400 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 PCDHGA11Q9Y5H2 935 aa6.56□□□□□ -1.36
SNX4-202ENST00000465505 CNTNAP5Q8WYK1 1306 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 OIP5O43482 229 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 MAP2K3P46734 347 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 POM121Q96HA1 1249 aa6.55□□□□□ -1.36
SNX4-202ENST00000465505 OXCT2Q9BYC2 517 aaPredicted RBP6.55□□□□□ -1.36
SNX4-202ENST00000465505 C2CD2LO14523 706 aa6.54□□□□□ -1.36
SNX4-202ENST00000465505 MTFR1Q15390 333 aa6.54□□□□□ -1.36
SNX4-202ENST00000465505 EFHC2Q5JST6 749 aa6.54□□□□□ -1.36
SNX4-202ENST00000465505 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
SNX4-202ENST00000465505 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
SNX4-202ENST00000465505 NEDD1Q8NHV4 660 aa6.54□□□□□ -1.36
SNX4-202ENST00000465505 NIFKQ9BYG3 293 aaKnown RBP6.54□□□□□ -1.36
SNX4-202ENST00000465505 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
SNX4-202ENST00000465505 ATXN7L1Q9ULK2 861 aaPredicted RBP6.54□□□□□ -1.36
SNX4-202ENST00000465505 DNMT3AQ9Y6K1 912 aaPredicted RBP6.54□□□□□ -1.36
SNX4-202ENST00000465505 A6NJY4 79 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 CDK2AP1O14519 115 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 BNIP3LO60238 219 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
SNX4-202ENST00000465505 SKIP12755 728 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 PLA2G4AP47712 749 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 CTBSQ01459 385 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 TBC1D9Q6ZT07 1266 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 NFATC2IPQ8NCF5 419 aa6.53□□□□□ -1.36
SNX4-202ENST00000465505 DNAAF2Q9NVR5 837 aaKnown RBP6.53□□□□□ -1.36
SNX4-202ENST00000465505 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
SNX4-202ENST00000465505 ATP4AP20648 1035 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 EML3Q32P44 896 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 C1orf216Q8TAB5 229 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 AIDAQ96BJ3 306 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 ABHD17AQ96GS6 310 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 ZCCHC2Q9C0B9 1178 aaKnown RBP6.52□□□□□ -1.37
SNX4-202ENST00000465505 USP3Q9Y6I4 520 aa6.52□□□□□ -1.37
SNX4-202ENST00000465505 PHF20L1A8MW92 1017 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 NLRP8Q86W28 1048 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 WWC1Q8IX03 1113 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 GALNT6Q8NCL4 622 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 GDF2Q9UK05 429 aaPredicted RBP6.51□□□□□ -1.37
SNX4-202ENST00000465505 NOD1Q9Y239 953 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 PCDHGC4Q9Y5F7 938 aa6.51□□□□□ -1.37
SNX4-202ENST00000465505 SHISA8B8ZZ34 492 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 RAD21O60216 631 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 FGFR3P22607 806 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 FLIIQ13045 1269 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 NCOA4Q13772 614 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 FIGNL1Q6PIW4 674 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 ADAMTS19Q8TE59 1207 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 EDARADDQ8WWZ3 215 aa6.5□□□□□ -1.37
SNX4-202ENST00000465505 HCN2Q9UL51 889 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms