RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	COL18A1	P39060	1754 aa		10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	USP54	Q70EL1	1684 aa		10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	CCER2	I3L3R5	266 aa		10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	EIF4A2	Q14240	407 aa	Known RBP	10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	RALBP1	Q15311	655 aa		10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	SYTL4	Q96C24	671 aa	Predicted RBP	10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	CAMKK2	Q96RR4	588 aa		10.31	□□□□□ -0.76
ITSN1-223	ENST00000465143	EYA1	Q99502	592 aa		10.3	□□□□□ -0.76
ITSN1-223	ENST00000465143	PARD3	Q8TEW0	1356 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	NPC1L1	Q9UHC9	1359 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	KCNQ2	O43526	872 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	NBPF14	Q5TI25	921 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	PTF1A	Q7RTS3	328 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	SPG7	Q9UQ90	795 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	BCL9	O00512	1426 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	PCDH11X	Q9BZA7	1347 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	PCDH11Y	Q9BZA8	1340 aa		10.29	□□□□□ -0.76
ITSN1-223	ENST00000465143	PLSCR1	O15162	318 aa		10.28	□□□□□ -0.76
ITSN1-223	ENST00000465143	MTHFS	P49914	203 aa		10.28	□□□□□ -0.76
ITSN1-223	ENST00000465143	OCEL1	Q9H607	264 aa		10.28	□□□□□ -0.76
ITSN1-223	ENST00000465143	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.28	□□□□□ -0.76
ITSN1-223	ENST00000465143	MEGF6	O75095	1541 aa		10.28	□□□□□ -0.76
ITSN1-223	ENST00000465143	PSD	A5PKW4	1024 aa	Predicted RBP	10.27	□□□□□ -0.77
ITSN1-223	ENST00000465143	PRIM1	P49642	420 aa	Known RBP	10.27	□□□□□ -0.77
ITSN1-223	ENST00000465143	R3HDM1	Q15032	1099 aa	Known RBP	10.27	□□□□□ -0.77
ITSN1-223	ENST00000465143	LRRC37A3	O60309	1634 aa		10.26	□□□□□ -0.77
ITSN1-223	ENST00000465143	CCDC184	Q52MB2	194 aa		10.26	□□□□□ -0.77
ITSN1-223	ENST00000465143	BRWD3	Q6RI45	1802 aa		10.26	□□□□□ -0.77
ITSN1-223	ENST00000465143	PARP4	Q9UKK3	1724 aa	Known RBP	10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	DIAPH1	O60610	1272 aa	Known RBP	10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	IL13	P35225	146 aa		10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	TXNRD1	Q16881	649 aa		10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	SULT6B1	Q6IMI4	303 aa		10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	MRS2	Q9HD23	443 aa		10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	IGSF1	Q8N6C5	1336 aa		10.25	□□□□□ -0.77
ITSN1-223	ENST00000465143	LTN1	O94822	1766 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	KIF20B	Q96Q89	1820 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	CYP27B1	O15528	508 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	PPP2R1A	P30153	589 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	CFAP53	Q96M91	514 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	STK32B	Q9NY57	414 aa		10.24	□□□□□ -0.77
ITSN1-223	ENST00000465143	U2SURP	O15042	1029 aa	Known RBP	10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	AMOT	Q4VCS5	1084 aa		10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	MPRIP	Q6WCQ1	1025 aa		10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	AEBP1	Q8IUX7	1158 aa		10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	IFNL2	Q8IZJ0	200 aa		10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	PEAK1	Q9H792	1746 aa		10.23	□□□□□ -0.77
ITSN1-223	ENST00000465143	HSP90AB1	P08238	724 aa	Known RBP	10.22	□□□□□ -0.77
ITSN1-223	ENST00000465143	HMOX1	P09601	288 aa		10.22	□□□□□ -0.77
ITSN1-223	ENST00000465143	C1orf141	Q5JVX7	400 aa		10.22	□□□□□ -0.77
ITSN1-223	ENST00000465143	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.22	□□□□□ -0.77
ITSN1-223	ENST00000465143	ANKRD26	Q9UPS8	1709 aa		10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	PHKG2	P15735	406 aa		10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	SLC27A3	Q5K4L6	730 aa		10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	MARVELD3	Q96A59	401 aa		10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	YTHDC1	Q96MU7	727 aa	Known RBP	10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	TMOD3	Q9NYL9	352 aa		10.21	□□□□□ -0.77
ITSN1-223	ENST00000465143	RGPD1	P0DJD0	1748 aa		10.21	□□□□□ -0.78
ITSN1-223	ENST00000465143	EP400	Q96L91	3159 aa		10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	NCAPD2	Q15021	1401 aa		10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	NKX1-1	Q15270	411 aa	Predicted RBP	10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	SMARCC1	Q92922	1105 aa	Predicted RBP	10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	RGPD5	Q99666	1765 aa		10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	CCNL1	Q9UK58	526 aa	Predicted RBP	10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	NUDC	Q9Y266	331 aa		10.2	□□□□□ -0.78
ITSN1-223	ENST00000465143	FAM208A	Q9UK61	1670 aa	Known RBP	10.19	□□□□□ -0.78
ITSN1-223	ENST00000465143	PLEKHG2	Q9H7P9	1386 aa		10.19	□□□□□ -0.78
ITSN1-223	ENST00000465143	DCAF5	Q96JK2	942 aa		10.19	□□□□□ -0.78
ITSN1-223	ENST00000465143	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.19	□□□□□ -0.78
ITSN1-223	ENST00000465143	HMGB2	P26583	209 aa	Known RBP	10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	KCNQ4	P56696	695 aa		10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	CABP4	P57796	275 aa		10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	SLC15A2	Q16348	729 aa		10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	FAM9B	Q8IZU0	186 aa		10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	PIGB	Q92521	554 aa		10.18	□□□□□ -0.78
ITSN1-223	ENST00000465143	KDR	P35968	1356 aa		10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	PALLD	Q8WX93	1383 aa		10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	PDCD7	Q8N8D1	485 aa	Known RBP	10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	PNISR	Q8TF01	805 aa	Known RBP	10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	LRRC4B	Q9NT99	713 aa		10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	TFCP2L1	Q9NZI6	479 aa		10.17	□□□□□ -0.78
ITSN1-223	ENST00000465143	ERVV-2	B6SEH9	535 aa		10.16	□□□□□ -0.78
ITSN1-223	ENST00000465143	AKAP4	Q5JQC9	854 aa		10.16	□□□□□ -0.78
ITSN1-223	ENST00000465143	KLHL34	Q8N239	644 aa		10.16	□□□□□ -0.78
ITSN1-223	ENST00000465143	TNS1	Q9HBL0	1735 aa	Known RBP	10.16	□□□□□ -0.78
ITSN1-223	ENST00000465143	ZBTB7A	O95365	584 aa		10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	ZNF827	Q17R98	1081 aa		10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	MTHFSD	Q2M296	383 aa	Known RBP	10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	GAS2L2	Q8NHY3	880 aa		10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	SPON1	Q9HCB6	807 aa		10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	FBXO3	Q9UK99	471 aa		10.15	□□□□□ -0.78
ITSN1-223	ENST00000465143	WNK3	Q9BYP7	1800 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	LOC102724428	A0A0B4J2F2	783 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	SNPH	O15079	494 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms