RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 DBN1Q16643 649 aa6.89□□□□□ -1.31
SCN3A-206ENST00000465043 OXLD1Q5BKU9 147 aa6.89□□□□□ -1.31
SCN3A-206ENST00000465043 ZNF385CQ66K41 422 aaPredicted RBP6.89□□□□□ -1.31
SCN3A-206ENST00000465043 PLPP7Q8NBV4 271 aa6.89□□□□□ -1.31
SCN3A-206ENST00000465043 NUCKS1Q9H1E3 243 aaKnown RBP6.89□□□□□ -1.31
SCN3A-206ENST00000465043 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
SCN3A-206ENST00000465043 CSB-PGBD3P0DP91 1061 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 GAS6Q14393 721 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 SUZ12Q15022 739 aaKnown RBP6.88□□□□□ -1.31
SCN3A-206ENST00000465043 PPARGC1BQ86YN6 1023 aaKnown RBP6.88□□□□□ -1.31
SCN3A-206ENST00000465043 PGBD3Q8N328 593 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 NFATC2IPQ8NCF5 419 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 RHBDD1Q8TEB9 315 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 GTPBP3Q969Y2 492 aaKnown RBP6.88□□□□□ -1.31
SCN3A-206ENST00000465043 FHDC1Q9C0D6 1143 aaPredicted RBP6.88□□□□□ -1.31
SCN3A-206ENST00000465043 LRRC4BQ9NT99 713 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 COG6Q9Y2V7 657 aa6.88□□□□□ -1.31
SCN3A-206ENST00000465043 TLR1Q15399 786 aa6.87□□□□□ -1.31
SCN3A-206ENST00000465043 CFHR5Q9BXR6 569 aa6.87□□□□□ -1.31
SCN3A-206ENST00000465043 ETNK1Q9HBU6 452 aa6.87□□□□□ -1.31
SCN3A-206ENST00000465043 INHAP05111 366 aa6.86□□□□□ -1.31
SCN3A-206ENST00000465043 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
SCN3A-206ENST00000465043 TSGA10IPQ3SY00 556 aa6.86□□□□□ -1.31
SCN3A-206ENST00000465043 C1orf216Q8TAB5 229 aa6.86□□□□□ -1.31
SCN3A-206ENST00000465043 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
SCN3A-206ENST00000465043 MX2P20592 715 aa6.85□□□□□ -1.31
SCN3A-206ENST00000465043 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
SCN3A-206ENST00000465043 SCARF2Q96GP6 870 aaPredicted RBP6.85□□□□□ -1.31
SCN3A-206ENST00000465043 IGF1RP08069 1367 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 UBTFP17480 764 aaKnown RBP6.84□□□□□ -1.31
SCN3A-206ENST00000465043 MAP2K3P46734 347 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 GDF10P55107 478 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 EML3Q32P44 896 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 C4orf17Q53FE4 359 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 KANK3Q6NY19 840 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 TBC1D9Q6ZT07 1266 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 NIFKQ9BYG3 293 aaKnown RBP6.84□□□□□ -1.31
SCN3A-206ENST00000465043 ALG2Q9H553 416 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
SCN3A-206ENST00000465043 GPR25O00155 361 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 BACH1O14867 736 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 CELA2BP08218 269 aaPredicted RBP6.83□□□□□ -1.32
SCN3A-206ENST00000465043 BCRP11274 1271 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 PHKA2P46019 1235 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 SCNN1DP51172 638 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 SMTNP53814 917 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
SCN3A-206ENST00000465043 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 SKIP12755 728 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 MSX1P28360 303 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 LYPD4Q6UWN0 246 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 CRISPLD1Q9H336 500 aa6.82□□□□□ -1.32
SCN3A-206ENST00000465043 ATXN7L1Q9ULK2 861 aaPredicted RBP6.82□□□□□ -1.32
SCN3A-206ENST00000465043 GDF11O95390 407 aa6.81□□□□□ -1.32
SCN3A-206ENST00000465043 RASSF7Q02833 373 aa6.81□□□□□ -1.32
SCN3A-206ENST00000465043 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
SCN3A-206ENST00000465043 PHF20L1A8MW92 1017 aa6.8□□□□□ -1.32
SCN3A-206ENST00000465043 PLA2G4AP47712 749 aa6.8□□□□□ -1.32
SCN3A-206ENST00000465043 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
SCN3A-206ENST00000465043 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
SCN3A-206ENST00000465043 NLRP8Q86W28 1048 aa6.8□□□□□ -1.32
SCN3A-206ENST00000465043 GDF2Q9UK05 429 aaPredicted RBP6.8□□□□□ -1.32
SCN3A-206ENST00000465043 A6NJY4 79 aa6.79□□□□□ -1.32
SCN3A-206ENST00000465043 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
SCN3A-206ENST00000465043 PSME1Q06323 249 aa6.79□□□□□ -1.32
SCN3A-206ENST00000465043 MTFR1Q15390 333 aa6.79□□□□□ -1.32
SCN3A-206ENST00000465043 BEND7Q8N7W2 519 aaPredicted RBP6.79□□□□□ -1.32
SCN3A-206ENST00000465043 OXCT2Q9BYC2 517 aaPredicted RBP6.79□□□□□ -1.32
SCN3A-206ENST00000465043 RUBCNLQ9H714 662 aa6.79□□□□□ -1.32
SCN3A-206ENST00000465043 PCDHGA11Q9Y5H2 935 aa6.79□□□□□ -1.32
SCN3A-206ENST00000465043 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 GSK3AP49840 483 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 GTF2IP78347 998 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 FOXK2Q01167 660 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 PLEKHM2Q8IWE5 1019 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 ACDQ96AP0 544 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 ZDHHC3Q9NYG2 299 aa6.78□□□□□ -1.32
SCN3A-206ENST00000465043 TMEM229AB2RXF0 380 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 OIP5O43482 229 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 STAU1O95793 577 aaKnown RBP6.77□□□□□ -1.33
SCN3A-206ENST00000465043 IRS1P35568 1242 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 NCOA4Q13772 614 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 AIDAQ96BJ3 306 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 SERTAD1Q9UHV2 236 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 PCDHGC4Q9Y5F7 938 aa6.77□□□□□ -1.33
SCN3A-206ENST00000465043 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
SCN3A-206ENST00000465043 THBS1P07996 1170 aa6.76□□□□□ -1.33
SCN3A-206ENST00000465043 BMP4P12644 408 aa6.76□□□□□ -1.33
SCN3A-206ENST00000465043 UBAP2LQ14157 1087 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms