RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 YBX3P16989 372 aaKnown RBP eCLIP19.85■□□□□ 0.77
ALMS1-202ENST00000464408 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
ALMS1-202ENST00000464408 AMER1Q5JTC6 1135 aaPredicted RBP19.85■□□□□ 0.77
ALMS1-202ENST00000464408 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
ALMS1-202ENST00000464408 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
ALMS1-202ENST00000464408 ZNF530Q6P9A1 599 aaPredicted RBP19.84■□□□□ 0.77
ALMS1-202ENST00000464408 PLEKHO1Q53GL0 409 aaPredicted RBP19.83■□□□□ 0.77
ALMS1-202ENST00000464408 GNPATO15228 680 aa19.82■□□□□ 0.76
ALMS1-202ENST00000464408 IL13P35225 146 aa19.82■□□□□ 0.76
ALMS1-202ENST00000464408 SULT6B1Q6IMI4 303 aa19.82■□□□□ 0.76
ALMS1-202ENST00000464408 ZNF831Q5JPB2 1677 aa19.81■□□□□ 0.76
ALMS1-202ENST00000464408 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
ALMS1-202ENST00000464408 ERVV-2B6SEH9 535 aa19.81■□□□□ 0.76
ALMS1-202ENST00000464408 SSFA2P28290 1259 aa19.81■□□□□ 0.76
ALMS1-202ENST00000464408 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
ALMS1-202ENST00000464408 SCN11AQ9UI33 1791 aa19.8■□□□□ 0.76
ALMS1-202ENST00000464408 VIRMAQ69YN4 1812 aaKnown RBP19.8■□□□□ 0.76
ALMS1-202ENST00000464408 HMGB2P26583 209 aaKnown RBP19.79■□□□□ 0.76
ALMS1-202ENST00000464408 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
ALMS1-202ENST00000464408 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
ALMS1-202ENST00000464408 CD2APQ9Y5K6 639 aa19.79■□□□□ 0.76
ALMS1-202ENST00000464408 HSP90AB1P08238 724 aaKnown RBP19.78■□□□□ 0.76
ALMS1-202ENST00000464408 CABP4P57796 275 aa19.78■□□□□ 0.76
ALMS1-202ENST00000464408 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
ALMS1-202ENST00000464408 MTHFSP49914 203 aa19.77■□□□□ 0.76
ALMS1-202ENST00000464408 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.76
ALMS1-202ENST00000464408 WWC3Q9ULE0 1092 aa19.77■□□□□ 0.76
ALMS1-202ENST00000464408 C4AP0C0L4 1744 aa19.76■□□□□ 0.75
ALMS1-202ENST00000464408 TJP1Q07157 1748 aa19.76■□□□□ 0.75
ALMS1-202ENST00000464408 C1orf141Q5JVX7 400 aa19.76■□□□□ 0.75
ALMS1-202ENST00000464408 NFATC2IPQ8NCF5 419 aa19.75■□□□□ 0.75
ALMS1-202ENST00000464408 KIAA1551Q9HCM1 1747 aa19.74■□□□□ 0.75
ALMS1-202ENST00000464408 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
ALMS1-202ENST00000464408 HMOX1P09601 288 aa19.74■□□□□ 0.75
ALMS1-202ENST00000464408 CNGB1Q14028 1251 aaPredicted RBP19.74■□□□□ 0.75
ALMS1-202ENST00000464408 KIF13BQ9NQT8 1826 aa19.73■□□□□ 0.75
ALMS1-202ENST00000464408 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
ALMS1-202ENST00000464408 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
ALMS1-202ENST00000464408 MMP10P09238 476 aa19.72■□□□□ 0.75
ALMS1-202ENST00000464408 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
ALMS1-202ENST00000464408 N4BP2Q86UW6 1770 aaPredicted RBP19.72■□□□□ 0.75
ALMS1-202ENST00000464408 CNTNAP4Q9C0A0 1308 aa19.72■□□□□ 0.75
ALMS1-202ENST00000464408 TRAPPC3LQ5T215 181 aa19.71■□□□□ 0.75
ALMS1-202ENST00000464408 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
ALMS1-202ENST00000464408 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
ALMS1-202ENST00000464408 LGR6Q9HBX8 967 aa19.71■□□□□ 0.75
ALMS1-202ENST00000464408 COL3A1P02461 1466 aaPredicted RBP19.71■□□□□ 0.75
ALMS1-202ENST00000464408 RPS6KA4O75676 772 aa19.69■□□□□ 0.74
ALMS1-202ENST00000464408 AKAP4Q5JQC9 854 aa19.69■□□□□ 0.74
ALMS1-202ENST00000464408 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
ALMS1-202ENST00000464408 MRC1P22897 1456 aa19.68■□□□□ 0.74
ALMS1-202ENST00000464408 GYS1P13807 737 aa19.68■□□□□ 0.74
ALMS1-202ENST00000464408 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
ALMS1-202ENST00000464408 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
ALMS1-202ENST00000464408 DIAPH1O60610 1272 aaKnown RBP19.67■□□□□ 0.74
ALMS1-202ENST00000464408 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
ALMS1-202ENST00000464408 SLC52A2Q9HAB3 445 aa19.67■□□□□ 0.74
ALMS1-202ENST00000464408 RNMTO43148 476 aaKnown RBP19.66■□□□□ 0.74
ALMS1-202ENST00000464408 ADRA2BP18089 450 aa19.66■□□□□ 0.74
ALMS1-202ENST00000464408 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
ALMS1-202ENST00000464408 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
ALMS1-202ENST00000464408 ATP10DQ9P241 1426 aa19.66■□□□□ 0.74
ALMS1-202ENST00000464408 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
ALMS1-202ENST00000464408 RFC4P35249 363 aa19.65■□□□□ 0.74
ALMS1-202ENST00000464408 C1QTNF8P60827 252 aa19.65■□□□□ 0.74
ALMS1-202ENST00000464408 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
ALMS1-202ENST00000464408 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
ALMS1-202ENST00000464408 DNAJC10Q8IXB1 793 aa19.64■□□□□ 0.73
ALMS1-202ENST00000464408 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
ALMS1-202ENST00000464408 NPC1L1Q9UHC9 1359 aa19.64■□□□□ 0.73
ALMS1-202ENST00000464408 BRCA1P38398 1863 aaKnown RBP19.64■□□□□ 0.73
ALMS1-202ENST00000464408 UBR2Q8IWV8 1755 aa19.63■□□□□ 0.73
ALMS1-202ENST00000464408 ADCY9O60503 1353 aa19.62■□□□□ 0.73
ALMS1-202ENST00000464408 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
ALMS1-202ENST00000464408 GIGYF1O75420 1035 aaPredicted RBP19.62■□□□□ 0.73
ALMS1-202ENST00000464408 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
ALMS1-202ENST00000464408 FKBP8Q14318 412 aa19.61■□□□□ 0.73
ALMS1-202ENST00000464408 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
ALMS1-202ENST00000464408 DDR1Q08345 913 aa19.6■□□□□ 0.73
ALMS1-202ENST00000464408 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
ALMS1-202ENST00000464408 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
ALMS1-202ENST00000464408 DPEP1P16444 411 aa19.59■□□□□ 0.73
ALMS1-202ENST00000464408 CYP19A1P11511 503 aaPredicted RBP19.58■□□□□ 0.72
ALMS1-202ENST00000464408 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.72
ALMS1-202ENST00000464408 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
ALMS1-202ENST00000464408 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
ALMS1-202ENST00000464408 SOS1Q07889 1333 aaPredicted RBP19.57■□□□□ 0.72
ALMS1-202ENST00000464408 TGFB2P61812 414 aa19.57■□□□□ 0.72
ALMS1-202ENST00000464408 AFDNP55196 1824 aaKnown RBP19.56■□□□□ 0.72
ALMS1-202ENST00000464408 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
ALMS1-202ENST00000464408 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
ALMS1-202ENST00000464408 KCNA3P22001 575 aa19.55■□□□□ 0.72
ALMS1-202ENST00000464408 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
ALMS1-202ENST00000464408 IL17REQ8NFR9 667 aa19.55■□□□□ 0.72
ALMS1-202ENST00000464408 ARFGEF1Q9Y6D6 1849 aa19.54■□□□□ 0.72
ALMS1-202ENST00000464408 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
ALMS1-202ENST00000464408 COL15A1P39059 1388 aa19.54■□□□□ 0.72
ALMS1-202ENST00000464408 POLRMTO00411 1230 aaKnown RBP19.53■□□□□ 0.72
ALMS1-202ENST00000464408 GPBP1L1Q9HC44 474 aaPredicted RBP19.53■□□□□ 0.72
ALMS1-202ENST00000464408 GNAT3A8MTJ3 354 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms