RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 WASHC2AQ641Q2 1341 aa20.1■□□□□ 0.81
SMC1A-204ENST00000463684 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
SMC1A-204ENST00000463684 PHKG2P15735 406 aa20.1■□□□□ 0.81
SMC1A-204ENST00000463684 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
SMC1A-204ENST00000463684 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
SMC1A-204ENST00000463684 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
SMC1A-204ENST00000463684 PKD1L3Q7Z443 1732 aa20.08■□□□□ 0.81
SMC1A-204ENST00000463684 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
SMC1A-204ENST00000463684 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
SMC1A-204ENST00000463684 FCHSD2O94868 740 aa20.07■□□□□ 0.8
SMC1A-204ENST00000463684 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
SMC1A-204ENST00000463684 RFC4P35249 363 aa20.06■□□□□ 0.8
SMC1A-204ENST00000463684 DNAJC5GQ8N7S2 189 aa20.06■□□□□ 0.8
SMC1A-204ENST00000463684 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
SMC1A-204ENST00000463684 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
SMC1A-204ENST00000463684 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
SMC1A-204ENST00000463684 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
SMC1A-204ENST00000463684 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
SMC1A-204ENST00000463684 DPEP1P16444 411 aa20.05■□□□□ 0.8
SMC1A-204ENST00000463684 ADRA2BP18089 450 aa20.05■□□□□ 0.8
SMC1A-204ENST00000463684 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
SMC1A-204ENST00000463684 C16orf71Q8IYS4 520 aaPredicted RBP20.05■□□□□ 0.8
SMC1A-204ENST00000463684 NMRK2Q9NPI5 230 aa20.05■□□□□ 0.8
SMC1A-204ENST00000463684 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
SMC1A-204ENST00000463684 GYS1P13807 737 aa20.03■□□□□ 0.8
SMC1A-204ENST00000463684 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
SMC1A-204ENST00000463684 RPS6KA4O75676 772 aa20.02■□□□□ 0.8
SMC1A-204ENST00000463684 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
SMC1A-204ENST00000463684 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
SMC1A-204ENST00000463684 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.79
SMC1A-204ENST00000463684 C9orf131Q5VYM1 1079 aa20.01■□□□□ 0.79
SMC1A-204ENST00000463684 DCAF5Q96JK2 942 aa20.01■□□□□ 0.79
SMC1A-204ENST00000463684 SLC4A9Q96Q91 983 aa20.01■□□□□ 0.79
SMC1A-204ENST00000463684 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
SMC1A-204ENST00000463684 PIM2Q9P1W9 311 aa20■□□□□ 0.79
SMC1A-204ENST00000463684 CNTNAP4Q9C0A0 1308 aa20■□□□□ 0.79
SMC1A-204ENST00000463684 KDRP35968 1356 aa19.99■□□□□ 0.79
SMC1A-204ENST00000463684 CABP4P57796 275 aa19.99■□□□□ 0.79
SMC1A-204ENST00000463684 PLEKHG2Q9H7P9 1386 aa19.98■□□□□ 0.79
SMC1A-204ENST00000463684 KCNA3P22001 575 aa19.98■□□□□ 0.79
SMC1A-204ENST00000463684 TNNT2P45379 298 aaPredicted RBP19.98■□□□□ 0.79
SMC1A-204ENST00000463684 FSTL1Q12841 308 aa19.98■□□□□ 0.79
SMC1A-204ENST00000463684 PLEKHO1Q53GL0 409 aaPredicted RBP19.98■□□□□ 0.79
SMC1A-204ENST00000463684 KDM2BQ8NHM5 1336 aa19.98■□□□□ 0.79
SMC1A-204ENST00000463684 N4BP2Q86UW6 1770 aaPredicted RBP19.98■□□□□ 0.79
SMC1A-204ENST00000463684 KIF13BQ9NQT8 1826 aa19.97■□□□□ 0.79
SMC1A-204ENST00000463684 DALRD3Q5D0E6 543 aaKnown RBP19.97■□□□□ 0.79
SMC1A-204ENST00000463684 KLRG1Q96E93 195 aa19.96■□□□□ 0.79
SMC1A-204ENST00000463684 PTCD1O75127 700 aaKnown RBP19.95■□□□□ 0.78
SMC1A-204ENST00000463684 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
SMC1A-204ENST00000463684 KIAA1551Q9HCM1 1747 aa19.95■□□□□ 0.78
SMC1A-204ENST00000463684 C4AP0C0L4 1744 aa19.94■□□□□ 0.78
SMC1A-204ENST00000463684 ZNF530Q6P9A1 599 aaPredicted RBP19.94■□□□□ 0.78
SMC1A-204ENST00000463684 RNF181Q9P0P0 153 aa19.94■□□□□ 0.78
SMC1A-204ENST00000463684 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
SMC1A-204ENST00000463684 MTHFSP49914 203 aa19.93■□□□□ 0.78
SMC1A-204ENST00000463684 HTRA3P83110 453 aa19.93■□□□□ 0.78
SMC1A-204ENST00000463684 RRAGCQ9HB90 399 aa19.93■□□□□ 0.78
SMC1A-204ENST00000463684 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
SMC1A-204ENST00000463684 C1orf141Q5JVX7 400 aa19.92■□□□□ 0.78
SMC1A-204ENST00000463684 POLR3GLQ9BT43 218 aa19.92■□□□□ 0.78
SMC1A-204ENST00000463684 SRP68Q9UHB9 627 aaKnown RBP19.92■□□□□ 0.78
SMC1A-204ENST00000463684 FKBP8Q14318 412 aa19.91■□□□□ 0.78
SMC1A-204ENST00000463684 JMYQ8N9B5 988 aa19.91■□□□□ 0.78
SMC1A-204ENST00000463684 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
SMC1A-204ENST00000463684 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
SMC1A-204ENST00000463684 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
SMC1A-204ENST00000463684 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
SMC1A-204ENST00000463684 CHRNA5P30532 468 aa19.89■□□□□ 0.77
SMC1A-204ENST00000463684 COL13A1Q5TAT6 717 aaPredicted RBP19.89■□□□□ 0.77
SMC1A-204ENST00000463684 KDM6AO15550 1401 aaPredicted RBP19.88■□□□□ 0.77
SMC1A-204ENST00000463684 ZPR1O75312 459 aa19.88■□□□□ 0.77
SMC1A-204ENST00000463684 DDR1Q08345 913 aa19.88■□□□□ 0.77
SMC1A-204ENST00000463684 SMC1BQ8NDV3 1235 aa19.88■□□□□ 0.77
SMC1A-204ENST00000463684 WDR90Q96KV7 1748 aa19.88■□□□□ 0.77
SMC1A-204ENST00000463684 COL5A3P25940 1745 aaPredicted RBP19.86■□□□□ 0.77
SMC1A-204ENST00000463684 POLRMTO00411 1230 aaKnown RBP19.86■□□□□ 0.77
SMC1A-204ENST00000463684 TM4SF1P30408 202 aa19.86■□□□□ 0.77
SMC1A-204ENST00000463684 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
SMC1A-204ENST00000463684 TNS4Q8IZW8 715 aa19.84■□□□□ 0.77
SMC1A-204ENST00000463684 BRCA1P38398 1863 aaKnown RBP19.84■□□□□ 0.77
SMC1A-204ENST00000463684 ARFGEF1Q9Y6D6 1849 aa19.83■□□□□ 0.77
SMC1A-204ENST00000463684 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.77
SMC1A-204ENST00000463684 CAPN15O75808 1086 aa19.83■□□□□ 0.77
SMC1A-204ENST00000463684 USPL1Q5W0Q7 1092 aa19.83■□□□□ 0.77
SMC1A-204ENST00000463684 VEGFAP15692 232 aaPredicted RBP19.82■□□□□ 0.76
SMC1A-204ENST00000463684 SULT6B1Q6IMI4 303 aa19.82■□□□□ 0.76
SMC1A-204ENST00000463684 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
SMC1A-204ENST00000463684 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
SMC1A-204ENST00000463684 LMNB1P20700 586 aa19.81■□□□□ 0.76
SMC1A-204ENST00000463684 RASSF7Q02833 373 aa19.81■□□□□ 0.76
SMC1A-204ENST00000463684 GLTPD2A6NH11 291 aa19.8■□□□□ 0.76
SMC1A-204ENST00000463684 MORC1Q86VD1 984 aa19.8■□□□□ 0.76
SMC1A-204ENST00000463684 DNAJC10Q8IXB1 793 aa19.8■□□□□ 0.76
SMC1A-204ENST00000463684 PANK3Q9H999 370 aa19.8■□□□□ 0.76
SMC1A-204ENST00000463684 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
SMC1A-204ENST00000463684 NFIXQ14938 502 aa19.78■□□□□ 0.76
SMC1A-204ENST00000463684 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
SMC1A-204ENST00000463684 TTLL6Q8N841 843 aa19.78■□□□□ 0.76
SMC1A-204ENST00000463684 NARFQ9UHQ1 456 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms