RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
COPS3-204ENST00000462236 PCDHB11Q9Y5F2 797 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 TLL2Q9Y6L7 1015 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 PTPRMP28827 1452 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 MYCP01106 439 aaPredicted RBP8.35□□□□□ -1.07
COPS3-204ENST00000462236 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
COPS3-204ENST00000462236 LMTK3Q96Q04 1460 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 MADDQ8WXG6 1647 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 ERVK-9P63128 1117 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 FOXC1Q12948 553 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
COPS3-204ENST00000462236 ABCA9Q8IUA7 1624 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 ALDH1A1P00352 501 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 FRMPD1Q5SYB0 1578 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
COPS3-204ENST00000462236 DEPDC4Q8N2C3 294 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 ESF1Q9H501 851 aaKnown RBP8.33□□□□□ -1.08
COPS3-204ENST00000462236 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
COPS3-204ENST00000462236 SETD1BQ9UPS6 1966 aaKnown RBP8.32□□□□□ -1.08
COPS3-204ENST00000462236 TTC24A2A3L6 582 aaPredicted RBP8.32□□□□□ -1.08
COPS3-204ENST00000462236 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
COPS3-204ENST00000462236 MYT1Q01538 1121 aa8.32□□□□□ -1.08
COPS3-204ENST00000462236 OXLD1Q5BKU9 147 aa8.32□□□□□ -1.08
COPS3-204ENST00000462236 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
COPS3-204ENST00000462236 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
COPS3-204ENST00000462236 RASA1P20936 1047 aa8.31□□□□□ -1.08
COPS3-204ENST00000462236 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
COPS3-204ENST00000462236 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
COPS3-204ENST00000462236 RICTORQ6R327 1708 aa8.31□□□□□ -1.08
COPS3-204ENST00000462236 RIMS1Q86UR5 1692 aaKnown RBP8.3□□□□□ -1.08
COPS3-204ENST00000462236 SIGLEC1Q9BZZ2 1709 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L15C9J2P7 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L10C9JJH3 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L13C9JLJ4 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L12C9JPN9 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L11C9JVI0 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L21D6R901 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L18D6R9N7 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L22D6RA61 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L17D6RBQ6 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L19D6RCP7 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L20D6RJB6 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 RAB15P59190 212 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 GTF2IP78347 998 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 USP17L24Q0WX57 530 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 PTK7Q13308 1070 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 NNTQ13423 1086 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 SIX5Q8N196 739 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 OGFOD1Q8N543 542 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
COPS3-204ENST00000462236 RAPGEF2Q9Y4G8 1499 aa8.3□□□□□ -1.08
COPS3-204ENST00000462236 NR3C2P08235 984 aa8.29□□□□□ -1.08
COPS3-204ENST00000462236 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
COPS3-204ENST00000462236 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
COPS3-204ENST00000462236 TRAIPQ9BWF2 469 aa8.29□□□□□ -1.08
COPS3-204ENST00000462236 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
COPS3-204ENST00000462236 PHLDB1Q86UU1 1377 aa8.28□□□□□ -1.08
COPS3-204ENST00000462236 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
COPS3-204ENST00000462236 CYP2U1Q7Z449 544 aa8.28□□□□□ -1.08
COPS3-204ENST00000462236 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
COPS3-204ENST00000462236 RBM19Q9Y4C8 960 aaKnown RBP8.28□□□□□ -1.08
COPS3-204ENST00000462236 M0R2N6 131 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 WASLO00401 505 aaPredicted RBP8.27□□□□□ -1.09
COPS3-204ENST00000462236 LILRA1O75019 489 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 SMPD1P17405 629 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 CLDN10P78369 228 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
COPS3-204ENST00000462236 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
COPS3-204ENST00000462236 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
COPS3-204ENST00000462236 ARHGEF40Q8TER5 1519 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 STRCQ7RTU9 1775 aa8.27□□□□□ -1.09
COPS3-204ENST00000462236 J3QL48 77 aa8.26□□□□□ -1.09
COPS3-204ENST00000462236 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
COPS3-204ENST00000462236 SCTRP47872 440 aa8.26□□□□□ -1.09
COPS3-204ENST00000462236 FAM200AQ8TCP9 573 aa8.26□□□□□ -1.09
COPS3-204ENST00000462236 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
COPS3-204ENST00000462236 NEO1Q92859 1461 aa8.26□□□□□ -1.09
COPS3-204ENST00000462236 FER1L4A9Z1Z3 1794 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 DKK1O94907 266 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 GNRH1P01148 92 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 CCDC102BQ68D86 513 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 Q6ZVU0 165 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 ZMIZ1Q9ULJ6 1067 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 ATP10BO94823 1461 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms