RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 EPXP11678 715 aa8.95□□□□□ -0.98
CCT4-203ENST00000461540 ZMYND10O75800 440 aa8.94□□□□□ -0.98
CCT4-203ENST00000461540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCT4-203ENST00000461540 CLN3Q13286 438 aa8.93□□□□□ -0.98
CCT4-203ENST00000461540 NKAPLQ5M9Q1 402 aa8.93□□□□□ -0.98
CCT4-203ENST00000461540 PNMA1Q8ND90 353 aa8.93□□□□□ -0.98
CCT4-203ENST00000461540 ATXN7L1Q9ULK2 861 aaPredicted RBP8.93□□□□□ -0.98
CCT4-203ENST00000461540 C2CD2LO14523 706 aa8.92□□□□□ -0.98
CCT4-203ENST00000461540 LBRQ14739 615 aaKnown RBP8.92□□□□□ -0.98
CCT4-203ENST00000461540 RNF135Q8IUD6 432 aa8.92□□□□□ -0.98
CCT4-203ENST00000461540 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
CCT4-203ENST00000461540 SPATA31C1P0DKV0 1188 aa8.91□□□□□ -0.98
CCT4-203ENST00000461540 DYRK3O43781 588 aa8.9□□□□□ -0.98
CCT4-203ENST00000461540 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.98
CCT4-203ENST00000461540 FGFR3P22607 806 aa8.9□□□□□ -0.98
CCT4-203ENST00000461540 PGBD3Q8N328 593 aa8.9□□□□□ -0.98
CCT4-203ENST00000461540 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 TRIM66O15016 1216 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 ARAFP10398 606 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 UBAP2LQ14157 1087 aaKnown RBP8.89□□□□□ -0.99
CCT4-203ENST00000461540 CC2D2BQ6DHV5 1058 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 CHSY3Q70JA7 882 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
CCT4-203ENST00000461540 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 CTBSQ01459 385 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 EFHC2Q5JST6 749 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 CYP2U1Q7Z449 544 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 ABHD17AQ96GS6 310 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
CCT4-203ENST00000461540 ERVK-9P63128 1117 aa8.87□□□□□ -0.99
CCT4-203ENST00000461540 PRSS36Q5K4E3 855 aa8.87□□□□□ -0.99
CCT4-203ENST00000461540 PLVAPQ9BX97 442 aa8.87□□□□□ -0.99
CCT4-203ENST00000461540 PHKA2P46019 1235 aa8.86□□□□□ -0.99
CCT4-203ENST00000461540 CCDC125Q86Z20 511 aa8.86□□□□□ -0.99
CCT4-203ENST00000461540 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
CCT4-203ENST00000461540 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
CCT4-203ENST00000461540 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
CCT4-203ENST00000461540 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
CCT4-203ENST00000461540 LRP8Q14114 963 aa8.85□□□□□ -0.99
CCT4-203ENST00000461540 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
CCT4-203ENST00000461540 BNIP3LO60238 219 aa8.83□□□□□ -1
CCT4-203ENST00000461540 APBA3O96018 575 aa8.83□□□□□ -1
CCT4-203ENST00000461540 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
CCT4-203ENST00000461540 NDFIP2Q9NV92 336 aa8.83□□□□□ -1
CCT4-203ENST00000461540 SPDYE3A6NKU9 549 aa8.82□□□□□ -1
CCT4-203ENST00000461540 COBLO75128 1261 aa8.81□□□□□ -1
CCT4-203ENST00000461540 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
CCT4-203ENST00000461540 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
CCT4-203ENST00000461540 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
CCT4-203ENST00000461540 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
CCT4-203ENST00000461540 ADH6P28332 368 aa8.8□□□□□ -1
CCT4-203ENST00000461540 MSX1P28360 303 aa8.8□□□□□ -1
CCT4-203ENST00000461540 GNASQ5JWF2 1037 aa8.8□□□□□ -1
CCT4-203ENST00000461540 RNF20Q5VTR2 975 aa8.8□□□□□ -1
CCT4-203ENST00000461540 CNKSR1Q969H4 720 aa8.8□□□□□ -1
CCT4-203ENST00000461540 AK7Q96M32 723 aa8.8□□□□□ -1
CCT4-203ENST00000461540 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
CCT4-203ENST00000461540 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
CCT4-203ENST00000461540 HYAL3O43820 417 aaPredicted RBP8.79□□□□□ -1
CCT4-203ENST00000461540 CENPCQ03188 943 aa8.79□□□□□ -1
CCT4-203ENST00000461540 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
CCT4-203ENST00000461540 PCDHB9Q9Y5E1 797 aa8.79□□□□□ -1
CCT4-203ENST00000461540 SCTRP47872 440 aa8.78□□□□□ -1
CCT4-203ENST00000461540 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
CCT4-203ENST00000461540 AP1G2O75843 785 aa8.77□□□□□ -1.01
CCT4-203ENST00000461540 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
CCT4-203ENST00000461540 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
CCT4-203ENST00000461540 OSBPL3Q9H4L5 887 aa8.77□□□□□ -1.01
CCT4-203ENST00000461540 TRAK2O60296 914 aa8.76□□□□□ -1.01
CCT4-203ENST00000461540 GNRH1P01148 92 aa8.76□□□□□ -1.01
CCT4-203ENST00000461540 FCHSD1Q86WN1 690 aa8.76□□□□□ -1.01
CCT4-203ENST00000461540 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
CCT4-203ENST00000461540 CRISPLD1Q9H336 500 aa8.75□□□□□ -1.01
CCT4-203ENST00000461540 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
CCT4-203ENST00000461540 PCDHGC4Q9Y5F7 938 aa8.75□□□□□ -1.01
CCT4-203ENST00000461540 IL2RAP01589 272 aa8.74□□□□□ -1.01
CCT4-203ENST00000461540 PDE4DQ08499 809 aa8.74□□□□□ -1.01
CCT4-203ENST00000461540 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
CCT4-203ENST00000461540 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
CCT4-203ENST00000461540 LCE1DQ5T752 114 aa8.73□□□□□ -1.01
CCT4-203ENST00000461540 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
CCT4-203ENST00000461540 KLF15Q9UIH9 416 aa8.73□□□□□ -1.01
CCT4-203ENST00000461540 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
CCT4-203ENST00000461540 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
CCT4-203ENST00000461540 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
CCT4-203ENST00000461540 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
CCT4-203ENST00000461540 TXKP42681 527 aa8.72□□□□□ -1.01
CCT4-203ENST00000461540 ZCCHC2Q9C0B9 1178 aaKnown RBP8.72□□□□□ -1.01
CCT4-203ENST00000461540 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
CCT4-203ENST00000461540 PAX4O43316 350 aa8.71□□□□□ -1.02
CCT4-203ENST00000461540 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.024e-27■■□□□ 12.1
CCT4-203ENST00000461540 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
CCT4-203ENST00000461540 FBXO31Q5XUX0 539 aaPredicted RBP8.7□□□□□ -1.02
CCT4-203ENST00000461540 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
CCT4-203ENST00000461540 ALAS2P22557 587 aa8.69□□□□□ -1.02
CCT4-203ENST00000461540 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
CCT4-203ENST00000461540 FHDC1Q9C0D6 1143 aaPredicted RBP8.69□□□□□ -1.02
CCT4-203ENST00000461540 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
CCT4-203ENST00000461540 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms