RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 RGL3Q3MIN7 710 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 TJAP1Q5JTD0 557 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 NCOA3Q9Y6Q9 1424 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 METP08581 1390 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 KIF1BO60333 1816 aa10.12□□□□□ -0.79
NUP50-212ENST00000461194 LILRB3O75022 631 aa10.11□□□□□ -0.79
NUP50-212ENST00000461194 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
NUP50-212ENST00000461194 ZNF516Q92618 1163 aa10.11□□□□□ -0.79
NUP50-212ENST00000461194 ZBTB3Q9H5J0 574 aa10.11□□□□□ -0.79
NUP50-212ENST00000461194 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
NUP50-212ENST00000461194 NRXN3Q9Y4C0 1643 aa10.11□□□□□ -0.79
NUP50-212ENST00000461194 HSPA1LP34931 641 aa10.1□□□□□ -0.79
NUP50-212ENST00000461194 MTMR2Q13614 643 aa10.1□□□□□ -0.79
NUP50-212ENST00000461194 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
NUP50-212ENST00000461194 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
NUP50-212ENST00000461194 MSH6P52701 1360 aa10.1□□□□□ -0.79
NUP50-212ENST00000461194 CHD2O14647 1828 aaKnown RBP10.1□□□□□ -0.79
NUP50-212ENST00000461194 ADGRF5Q8IZF2 1346 aa10.09□□□□□ -0.79
NUP50-212ENST00000461194 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
NUP50-212ENST00000461194 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
NUP50-212ENST00000461194 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
NUP50-212ENST00000461194 ZPR1O75312 459 aa10.08□□□□□ -0.8
NUP50-212ENST00000461194 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
NUP50-212ENST00000461194 C19orf44Q9H6X5 657 aa10.08□□□□□ -0.8
NUP50-212ENST00000461194 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
NUP50-212ENST00000461194 XIRP1Q702N8 1843 aaKnown RBP10.07□□□□□ -0.8
NUP50-212ENST00000461194 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
NUP50-212ENST00000461194 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
NUP50-212ENST00000461194 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 RFC5P40937 340 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 SPSB2Q99619 263 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
NUP50-212ENST00000461194 SLAIN2Q9P270 581 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 PPLO60437 1756 aa10.06□□□□□ -0.8
NUP50-212ENST00000461194 XRN1Q8IZH2 1706 aaKnown RBP10.05□□□□□ -0.8
NUP50-212ENST00000461194 TLL1O43897 1013 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 ATF3P18847 181 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 NKX2-3Q8TAU0 364 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 TSC1Q92574 1164 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 PTCH1Q13635 1447 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 PRAG1Q86YV5 1406 aa10.05□□□□□ -0.8
NUP50-212ENST00000461194 AP1G2O75843 785 aa10.04□□□□□ -0.8
NUP50-212ENST00000461194 KCNC4Q03721 635 aa10.04□□□□□ -0.8
NUP50-212ENST00000461194 C14orf93Q9H972 538 aaKnown RBP10.04□□□□□ -0.8
NUP50-212ENST00000461194 MYOM2P54296 1465 aa10.04□□□□□ -0.8
NUP50-212ENST00000461194 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
NUP50-212ENST00000461194 ROBO2Q9HCK4 1378 aa10.03□□□□□ -0.8
NUP50-212ENST00000461194 CFAP99D6REC4 459 aa10.03□□□□□ -0.8
NUP50-212ENST00000461194 DCCP43146 1447 aa10.03□□□□□ -0.8
NUP50-212ENST00000461194 FAM160A2Q8N612 972 aaPredicted RBP10.03□□□□□ -0.8
NUP50-212ENST00000461194 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
NUP50-212ENST00000461194 SETD1AO15047 1707 aaKnown RBP10.02□□□□□ -0.8
NUP50-212ENST00000461194 TRIM26Q12899 539 aaPredicted RBP10.02□□□□□ -0.81
NUP50-212ENST00000461194 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.81
NUP50-212ENST00000461194 CFAP70Q5T0N1 1121 aa10.02□□□□□ -0.81
NUP50-212ENST00000461194 TMEM132EQ6IEE7 984 aa10.02□□□□□ -0.81
NUP50-212ENST00000461194 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 ADGRL3Q9HAR2 1447 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 ADH1BP00325 375 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 DCAF11Q8TEB1 546 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 STK26Q9P289 416 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
NUP50-212ENST00000461194 DHX57Q6P158 1386 aaKnown RBP10.01□□□□□ -0.81
NUP50-212ENST00000461194 TECPR2O15040 1411 aa10□□□□□ -0.81
NUP50-212ENST00000461194 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
NUP50-212ENST00000461194 CTDSPL2Q05D32 466 aa10□□□□□ -0.81
NUP50-212ENST00000461194 SIRT1Q96EB6 747 aa10□□□□□ -0.81
NUP50-212ENST00000461194 DISP3Q9P2K9 1392 aa10□□□□□ -0.81
NUP50-212ENST00000461194 MST1RQ04912 1400 aa9.99□□□□□ -0.81
NUP50-212ENST00000461194 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
NUP50-212ENST00000461194 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
NUP50-212ENST00000461194 ASXL1Q8IXJ9 1541 aa9.99□□□□□ -0.81
NUP50-212ENST00000461194 BRINP3Q76B58 766 aa9.99□□□□□ -0.81
NUP50-212ENST00000461194 ROBO1Q9Y6N7 1651 aa9.99□□□□□ -0.81
NUP50-212ENST00000461194 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
NUP50-212ENST00000461194 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
NUP50-212ENST00000461194 SLC6A16Q9GZN6 736 aa9.98□□□□□ -0.81
NUP50-212ENST00000461194 PRDM9Q9NQV7 894 aa9.98□□□□□ -0.81
NUP50-212ENST00000461194 S1PR4O95977 384 aa9.96□□□□□ -0.82
NUP50-212ENST00000461194 MSS51Q4VC12 460 aa9.96□□□□□ -0.82
NUP50-212ENST00000461194 SNRKQ9NRH2 765 aa9.96□□□□□ -0.82
NUP50-212ENST00000461194 PLEKHH1Q9ULM0 1364 aa9.96□□□□□ -0.82
NUP50-212ENST00000461194 C1orf167Q5SNV9 1468 aa9.96□□□□□ -0.82
NUP50-212ENST00000461194 PER1O15534 1290 aaPredicted RBP9.95□□□□□ -0.82
NUP50-212ENST00000461194 JUNDP17535 347 aa9.95□□□□□ -0.82
NUP50-212ENST00000461194 DESI1Q6ICB0 168 aa9.95□□□□□ -0.82
NUP50-212ENST00000461194 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
NUP50-212ENST00000461194 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
NUP50-212ENST00000461194 LAMC1P11047 1609 aa9.95□□□□□ -0.82
NUP50-212ENST00000461194 NALCNQ8IZF0 1738 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 JCADQ9P266 1359 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 USP17L8P0C7I0 530 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms