RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
PCYT1A-212ENST00000460677 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
PCYT1A-212ENST00000460677 MRC1P22897 1456 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 LRP6O75581 1613 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 NGLY1Q96IV0 654 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 CDCA7Q9BWT1 371 aaPredicted RBP20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
PCYT1A-212ENST00000460677 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
PCYT1A-212ENST00000460677 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
PCYT1A-212ENST00000460677 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
PCYT1A-212ENST00000460677 MS4A1P11836 297 aa20.29■□□□□ 0.84
PCYT1A-212ENST00000460677 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
PCYT1A-212ENST00000460677 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
PCYT1A-212ENST00000460677 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
PCYT1A-212ENST00000460677 DDX54Q8TDD1 881 aaKnown RBP20.28■□□□□ 0.84
PCYT1A-212ENST00000460677 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
PCYT1A-212ENST00000460677 NFATC2IPQ8NCF5 419 aa20.27■□□□□ 0.84
PCYT1A-212ENST00000460677 ARHGAP45Q92619 1136 aa20.27■□□□□ 0.84
PCYT1A-212ENST00000460677 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
PCYT1A-212ENST00000460677 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
PCYT1A-212ENST00000460677 KCNQ3O43525 872 aa20.26■□□□□ 0.83
PCYT1A-212ENST00000460677 HOXB7P09629 217 aa20.26■□□□□ 0.83
PCYT1A-212ENST00000460677 PANK1Q8TE04 598 aa20.26■□□□□ 0.83
PCYT1A-212ENST00000460677 ERVV-2B6SEH9 535 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 EXOC5O00471 708 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 TRIM27P14373 513 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 CABP4P57796 275 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 BARGINQ6ZT62 677 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
PCYT1A-212ENST00000460677 RLBP1P12271 317 aa20.24■□□□□ 0.83
PCYT1A-212ENST00000460677 VPS72Q15906 364 aa20.24■□□□□ 0.83
PCYT1A-212ENST00000460677 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
PCYT1A-212ENST00000460677 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 CLUAP1Q96AJ1 413 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 CHMP4AQ9BY43 222 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 TNS2Q63HR2 1409 aa20.23■□□□□ 0.83
PCYT1A-212ENST00000460677 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
PCYT1A-212ENST00000460677 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
PCYT1A-212ENST00000460677 B4GALNT3Q6L9W6 998 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 STK31Q9BXU1 1019 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 USP21Q9UK80 565 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
PCYT1A-212ENST00000460677 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
PCYT1A-212ENST00000460677 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
PCYT1A-212ENST00000460677 HDGFL1Q5TGJ6 251 aa20.2■□□□□ 0.82
PCYT1A-212ENST00000460677 DDB1Q16531 1140 aa20.19■□□□□ 0.82
PCYT1A-212ENST00000460677 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
PCYT1A-212ENST00000460677 PTPRCP08575 1304 aa20.18■□□□□ 0.82
PCYT1A-212ENST00000460677 AAMPQ13685 434 aa20.18■□□□□ 0.82
PCYT1A-212ENST00000460677 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
PCYT1A-212ENST00000460677 NECTIN2Q92692 538 aa20.17■□□□□ 0.82
PCYT1A-212ENST00000460677 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
PCYT1A-212ENST00000460677 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
PCYT1A-212ENST00000460677 ABCC4O15439 1325 aa20.16■□□□□ 0.82
PCYT1A-212ENST00000460677 AFF2P51816 1311 aa20.16■□□□□ 0.82
PCYT1A-212ENST00000460677 ZNF496Q96IT1 587 aaPredicted RBP20.15■□□□□ 0.82
PCYT1A-212ENST00000460677 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
PCYT1A-212ENST00000460677 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
PCYT1A-212ENST00000460677 CACNA1FO60840 1977 aa20.14■□□□□ 0.82
PCYT1A-212ENST00000460677 FAM98CQ17RN3 349 aaKnown RBP20.14■□□□□ 0.81
PCYT1A-212ENST00000460677 G2E3Q7L622 706 aa20.14■□□□□ 0.81
PCYT1A-212ENST00000460677 ITPRIPQ8IWB1 547 aa20.14■□□□□ 0.81
PCYT1A-212ENST00000460677 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
PCYT1A-212ENST00000460677 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
PCYT1A-212ENST00000460677 RGS12O14924 1447 aa20.13■□□□□ 0.81
PCYT1A-212ENST00000460677 SNRPA1P09661 255 aaKnown RBP20.12■□□□□ 0.81
PCYT1A-212ENST00000460677 PRAMEF22A3QJZ6 481 aa20.11■□□□□ 0.81
PCYT1A-212ENST00000460677 FLIIQ13045 1269 aa20.11■□□□□ 0.81
PCYT1A-212ENST00000460677 MARCH10Q8NA82 808 aaPredicted RBP20.11■□□□□ 0.81
PCYT1A-212ENST00000460677 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
PCYT1A-212ENST00000460677 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
PCYT1A-212ENST00000460677 PIGBQ92521 554 aa20.1■□□□□ 0.81
PCYT1A-212ENST00000460677 ATRNO75882 1429 aa20.1■□□□□ 0.81
PCYT1A-212ENST00000460677 UBR2Q8IWV8 1755 aa20.1■□□□□ 0.81
PCYT1A-212ENST00000460677 ITGB4P16144 1822 aa20.1■□□□□ 0.81
PCYT1A-212ENST00000460677 C5P01031 1676 aa20.1■□□□□ 0.81
PCYT1A-212ENST00000460677 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 BCL9O00512 1426 aa20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 INTS3Q68E01 1043 aaKnown RBP20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 GJD4Q96KN9 370 aaPredicted RBP20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 TRPC5Q9UL62 973 aaPredicted RBP20.09■□□□□ 0.81
PCYT1A-212ENST00000460677 GLI3P10071 1580 aa20.08■□□□□ 0.81
PCYT1A-212ENST00000460677 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.8
PCYT1A-212ENST00000460677 PHAXQ9H814 394 aaKnown RBP20.08■□□□□ 0.8
PCYT1A-212ENST00000460677 THSD7AQ9UPZ6 1657 aa20.07■□□□□ 0.8
PCYT1A-212ENST00000460677 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
PCYT1A-212ENST00000460677 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms