RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 SPATA31A5Q5VU36 1347 aa18.47■□□□□ 0.55
PCNP-202ENST00000460231 SPATA31A7Q8IWB4 1347 aa18.47■□□□□ 0.55
PCNP-202ENST00000460231 TRIM27P14373 513 aa18.47■□□□□ 0.55
PCNP-202ENST00000460231 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
PCNP-202ENST00000460231 SLC52A2Q9HAB3 445 aa18.47■□□□□ 0.55
PCNP-202ENST00000460231 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
PCNP-202ENST00000460231 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
PCNP-202ENST00000460231 WNK3Q9BYP7 1800 aa18.46■□□□□ 0.55
PCNP-202ENST00000460231 G2E3Q7L622 706 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
PCNP-202ENST00000460231 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
PCNP-202ENST00000460231 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
PCNP-202ENST00000460231 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
PCNP-202ENST00000460231 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
PCNP-202ENST00000460231 KAT6BQ8WYB5 2073 aa18.44■□□□□ 0.54
PCNP-202ENST00000460231 ANXA1P04083 346 aa18.43■□□□□ 0.54
PCNP-202ENST00000460231 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
PCNP-202ENST00000460231 MRC1P22897 1456 aa18.42■□□□□ 0.54
PCNP-202ENST00000460231 USP21Q9UK80 565 aa18.42■□□□□ 0.54
PCNP-202ENST00000460231 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
PCNP-202ENST00000460231 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
PCNP-202ENST00000460231 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
PCNP-202ENST00000460231 ZNF790Q6PG37 636 aa18.41■□□□□ 0.54
PCNP-202ENST00000460231 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
PCNP-202ENST00000460231 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 AFF2P51816 1311 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 GLI3P10071 1580 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 C5P01031 1676 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 MARCH10Q8NA82 808 aaPredicted RBP18.4■□□□□ 0.54
PCNP-202ENST00000460231 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
PCNP-202ENST00000460231 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.54
PCNP-202ENST00000460231 RGS12O14924 1447 aa18.39■□□□□ 0.54
PCNP-202ENST00000460231 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
PCNP-202ENST00000460231 CABP4P57796 275 aa18.39■□□□□ 0.53
PCNP-202ENST00000460231 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
PCNP-202ENST00000460231 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
PCNP-202ENST00000460231 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
PCNP-202ENST00000460231 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
PCNP-202ENST00000460231 TMEM57Q8N5G2 664 aa18.38■□□□□ 0.53
PCNP-202ENST00000460231 EXOC5O00471 708 aa18.38■□□□□ 0.53
PCNP-202ENST00000460231 VPS72Q15906 364 aa18.38■□□□□ 0.53
PCNP-202ENST00000460231 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
PCNP-202ENST00000460231 PHAXQ9H814 394 aaKnown RBP18.38■□□□□ 0.53
PCNP-202ENST00000460231 TNS2Q63HR2 1409 aa18.37■□□□□ 0.53
PCNP-202ENST00000460231 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
PCNP-202ENST00000460231 PDE3AQ14432 1141 aa18.37■□□□□ 0.53
PCNP-202ENST00000460231 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
PCNP-202ENST00000460231 PIGBQ92521 554 aa18.37■□□□□ 0.53
PCNP-202ENST00000460231 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
PCNP-202ENST00000460231 ITGB4P16144 1822 aa18.36■□□□□ 0.53
PCNP-202ENST00000460231 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
PCNP-202ENST00000460231 F6X3S4 739 aa18.36■□□□□ 0.53
PCNP-202ENST00000460231 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
PCNP-202ENST00000460231 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
PCNP-202ENST00000460231 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
PCNP-202ENST00000460231 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
PCNP-202ENST00000460231 DDB1Q16531 1140 aa18.35■□□□□ 0.53
PCNP-202ENST00000460231 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
PCNP-202ENST00000460231 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
PCNP-202ENST00000460231 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
PCNP-202ENST00000460231 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
PCNP-202ENST00000460231 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
PCNP-202ENST00000460231 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
PCNP-202ENST00000460231 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
PCNP-202ENST00000460231 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
PCNP-202ENST00000460231 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
PCNP-202ENST00000460231 KCNQ2O43526 872 aa18.33■□□□□ 0.52
PCNP-202ENST00000460231 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.52
PCNP-202ENST00000460231 DOT1LQ8TEK3 1739 aa18.33■□□□□ 0.52
PCNP-202ENST00000460231 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
PCNP-202ENST00000460231 ERVV-2B6SEH9 535 aa18.32■□□□□ 0.52
PCNP-202ENST00000460231 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
PCNP-202ENST00000460231 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
PCNP-202ENST00000460231 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
PCNP-202ENST00000460231 MVPQ14764 893 aaKnown RBP18.32■□□□□ 0.52
PCNP-202ENST00000460231 ITPRIPQ8IWB1 547 aa18.32■□□□□ 0.52
PCNP-202ENST00000460231 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
PCNP-202ENST00000460231 PDIA6Q15084 440 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
PCNP-202ENST00000460231 PAPPAQ13219 1627 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 A0A0G2JS52 829 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 MYT1Q01538 1121 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
PCNP-202ENST00000460231 ABCC4O15439 1325 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
PCNP-202ENST00000460231 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 FLIIQ13045 1269 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
PCNP-202ENST00000460231 BCL9O00512 1426 aa18.29■□□□□ 0.52
PCNP-202ENST00000460231 IGHDP01880 384 aa18.28■□□□□ 0.52
PCNP-202ENST00000460231 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms