RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
NUCB1-208ENST00000460125 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
NUCB1-208ENST00000460125 KCPQ6ZWJ8 1503 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 ITGB4P16144 1822 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 HSPA1AP0DMV8 641 aaKnown RBP15.39■□□□□ 0.05
NUCB1-208ENST00000460125 HSPA1BP0DMV9 641 aaKnown RBP15.39■□□□□ 0.05
NUCB1-208ENST00000460125 KCNA3P22001 575 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 TMF1P82094 1093 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 SMC1BQ8NDV3 1235 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 CCDC87Q9NVE4 849 aa15.39■□□□□ 0.05
NUCB1-208ENST00000460125 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
NUCB1-208ENST00000460125 HSP90AB2PQ58FF8 381 aa15.38■□□□□ 0.05
NUCB1-208ENST00000460125 TRAPPC3LQ5T215 181 aa15.38■□□□□ 0.05
NUCB1-208ENST00000460125 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
NUCB1-208ENST00000460125 INSRP06213 1382 aa15.37■□□□□ 0.05
NUCB1-208ENST00000460125 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
NUCB1-208ENST00000460125 DCAF5Q96JK2 942 aa15.36■□□□□ 0.05
NUCB1-208ENST00000460125 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
NUCB1-208ENST00000460125 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
NUCB1-208ENST00000460125 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
NUCB1-208ENST00000460125 FYB1O15117 783 aa15.35■□□□□ 0.05
NUCB1-208ENST00000460125 PIM2Q9P1W9 311 aa15.35■□□□□ 0.05
NUCB1-208ENST00000460125 PARP3Q9Y6F1 533 aa15.35■□□□□ 0.05
NUCB1-208ENST00000460125 BRCA1P38398 1863 aaKnown RBP15.34■□□□□ 0.05
NUCB1-208ENST00000460125 GYS1P13807 737 aa15.34■□□□□ 0.05
NUCB1-208ENST00000460125 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
NUCB1-208ENST00000460125 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
NUCB1-208ENST00000460125 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
NUCB1-208ENST00000460125 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
NUCB1-208ENST00000460125 SLC34A2O95436 690 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 ADRA2BP18089 450 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
NUCB1-208ENST00000460125 SPG7Q9UQ90 795 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 PKD1L3Q7Z443 1732 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 FLT4P35916 1363 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 KIF24Q5T7B8 1368 aa15.33■□□□□ 0.04
NUCB1-208ENST00000460125 RC3H1Q5TC82 1133 aaKnown RBP15.32■□□□□ 0.04
NUCB1-208ENST00000460125 TNRC6CQ9HCJ0 1690 aaKnown RBP15.32■□□□□ 0.04
NUCB1-208ENST00000460125 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
NUCB1-208ENST00000460125 RPS6KA4O75676 772 aa15.3■□□□□ 0.04
NUCB1-208ENST00000460125 RFC4P35249 363 aa15.3■□□□□ 0.04
NUCB1-208ENST00000460125 KDRP35968 1356 aa15.3■□□□□ 0.04
NUCB1-208ENST00000460125 NCAPD2Q15021 1401 aa15.3■□□□□ 0.04
NUCB1-208ENST00000460125 TESK2Q96S53 571 aa15.3■□□□□ 0.04
NUCB1-208ENST00000460125 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
NUCB1-208ENST00000460125 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
NUCB1-208ENST00000460125 VEGFAP15692 232 aaPredicted RBP15.29■□□□□ 0.04
NUCB1-208ENST00000460125 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
NUCB1-208ENST00000460125 PHKG2P15735 406 aa15.28■□□□□ 0.04
NUCB1-208ENST00000460125 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
NUCB1-208ENST00000460125 IFNL2Q8IZJ0 200 aa15.28■□□□□ 0.04
NUCB1-208ENST00000460125 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
NUCB1-208ENST00000460125 GLTPD2A6NH11 291 aa15.27■□□□□ 0.04
NUCB1-208ENST00000460125 CHRNA5P30532 468 aa15.27■□□□□ 0.04
NUCB1-208ENST00000460125 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
NUCB1-208ENST00000460125 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
NUCB1-208ENST00000460125 SBF1O95248 1867 aa15.26■□□□□ 0.03
NUCB1-208ENST00000460125 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
NUCB1-208ENST00000460125 RASSF7Q02833 373 aa15.25■□□□□ 0.03
NUCB1-208ENST00000460125 DDR1Q08345 913 aa15.25■□□□□ 0.03
NUCB1-208ENST00000460125 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
NUCB1-208ENST00000460125 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
NUCB1-208ENST00000460125 FKBP8Q14318 412 aa15.24■□□□□ 0.03
NUCB1-208ENST00000460125 EYA1Q99502 592 aa15.24■□□□□ 0.03
NUCB1-208ENST00000460125 ZNF831Q5JPB2 1677 aa15.24■□□□□ 0.03
NUCB1-208ENST00000460125 POTECB2RU33 542 aa15.23■□□□□ 0.03
NUCB1-208ENST00000460125 ERVV-2B6SEH9 535 aa15.23■□□□□ 0.03
NUCB1-208ENST00000460125 LMNB1P20700 586 aa15.23■□□□□ 0.03
NUCB1-208ENST00000460125 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
NUCB1-208ENST00000460125 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
NUCB1-208ENST00000460125 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
NUCB1-208ENST00000460125 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
NUCB1-208ENST00000460125 COL5A3P25940 1745 aaPredicted RBP15.21■□□□□ 0.03
NUCB1-208ENST00000460125 POLRMTO00411 1230 aaKnown RBP15.21■□□□□ 0.03
NUCB1-208ENST00000460125 FOXN1O15353 648 aa15.21■□□□□ 0.03
NUCB1-208ENST00000460125 TM4SF1P30408 202 aa15.21■□□□□ 0.03
NUCB1-208ENST00000460125 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
NUCB1-208ENST00000460125 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
NUCB1-208ENST00000460125 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
NUCB1-208ENST00000460125 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
NUCB1-208ENST00000460125 CRKLP46109 303 aaKnown RBP15.19■□□□□ 0.02
NUCB1-208ENST00000460125 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
NUCB1-208ENST00000460125 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
NUCB1-208ENST00000460125 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 NFKBIEO00221 500 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
NUCB1-208ENST00000460125 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
NUCB1-208ENST00000460125 CABP4P57796 275 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 PCDH10Q9P2E7 1040 aa15.16■□□□□ 0.02
NUCB1-208ENST00000460125 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
NUCB1-208ENST00000460125 INTS5Q6P9B9 1019 aaKnown RBP15.15■□□□□ 0.02
NUCB1-208ENST00000460125 CARD14Q9BXL6 1004 aa15.15■□□□□ 0.02
NUCB1-208ENST00000460125 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
NUCB1-208ENST00000460125 ZPR1O75312 459 aa15.13■□□□□ 0.01
NUCB1-208ENST00000460125 EIF4A2Q14240 407 aaKnown RBP15.13■□□□□ 0.01
NUCB1-208ENST00000460125 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms