RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 ITPK1Q13572 414 aa21.34■■□□□ 1.01
NCDN-206ENST00000459931 C4BP0C0L5 1744 aa21.34■■□□□ 1.01
NCDN-206ENST00000459931 TAF1LQ8IZX4 1826 aa21.34■■□□□ 1.01
NCDN-206ENST00000459931 KIF7Q2M1P5 1343 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 GNPATO15228 680 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 MTHFSP49914 203 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 CABP4P57796 275 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 SULT6B1Q6IMI4 303 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 RBM42Q9BTD8 480 aaKnown RBP21.33■■□□□ 1.01
NCDN-206ENST00000459931 CD2APQ9Y5K6 639 aa21.33■■□□□ 1.01
NCDN-206ENST00000459931 AMER1Q5JTC6 1135 aaPredicted RBP21.32■■□□□ 1
NCDN-206ENST00000459931 GRIN3BO60391 1043 aa21.31■■□□□ 1
NCDN-206ENST00000459931 CHD4Q14839 1912 aa21.3■■□□□ 1
NCDN-206ENST00000459931 IL13P35225 146 aa21.3■■□□□ 1
NCDN-206ENST00000459931 YBX3P16989 372 aaKnown RBP eCLIP21.29■■□□□ 1
NCDN-206ENST00000459931 TRAPPC3LQ5T215 181 aa21.28■■□□□ 1
NCDN-206ENST00000459931 RTCBQ9Y3I0 505 aaKnown RBP21.28■■□□□ 1
NCDN-206ENST00000459931 NFATC2IPQ8NCF5 419 aa21.27■■□□□ 1
NCDN-206ENST00000459931 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
NCDN-206ENST00000459931 SLC4A9Q96Q91 983 aa21.26■□□□□ 0.99
NCDN-206ENST00000459931 PER1O15534 1290 aaPredicted RBP21.25■□□□□ 0.99
NCDN-206ENST00000459931 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
NCDN-206ENST00000459931 UBR3Q6ZT12 1888 aa21.25■□□□□ 0.99
NCDN-206ENST00000459931 KDM6AO15550 1401 aaPredicted RBP21.24■□□□□ 0.99
NCDN-206ENST00000459931 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
NCDN-206ENST00000459931 KDRP35968 1356 aa21.23■□□□□ 0.99
NCDN-206ENST00000459931 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
NCDN-206ENST00000459931 MMP10P09238 476 aa21.22■□□□□ 0.99
NCDN-206ENST00000459931 HMOX1P09601 288 aa21.22■□□□□ 0.99
NCDN-206ENST00000459931 RFC4P35249 363 aa21.22■□□□□ 0.99
NCDN-206ENST00000459931 NLGN1Q8N2Q7 840 aa21.22■□□□□ 0.99
NCDN-206ENST00000459931 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
NCDN-206ENST00000459931 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
NCDN-206ENST00000459931 ARHGEF1Q92888 912 aaKnown RBP21.21■□□□□ 0.99
NCDN-206ENST00000459931 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
NCDN-206ENST00000459931 ADRA2BP18089 450 aa21.2■□□□□ 0.98
NCDN-206ENST00000459931 WWC3Q9ULE0 1092 aa21.2■□□□□ 0.98
NCDN-206ENST00000459931 CNTNAP4Q9C0A0 1308 aa21.19■□□□□ 0.98
NCDN-206ENST00000459931 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
NCDN-206ENST00000459931 C1QTNF8P60827 252 aa21.17■□□□□ 0.98
NCDN-206ENST00000459931 CRKLP46109 303 aaKnown RBP21.16■□□□□ 0.98
NCDN-206ENST00000459931 SLC52A2Q9HAB3 445 aa21.16■□□□□ 0.98
NCDN-206ENST00000459931 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
NCDN-206ENST00000459931 RNMTO43148 476 aaKnown RBP21.14■□□□□ 0.97
NCDN-206ENST00000459931 GYS1P13807 737 aa21.14■□□□□ 0.97
NCDN-206ENST00000459931 MTHFSDQ2M296 383 aaKnown RBP21.14■□□□□ 0.97
NCDN-206ENST00000459931 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.97
NCDN-206ENST00000459931 ZNF831Q5JPB2 1677 aa21.13■□□□□ 0.97
NCDN-206ENST00000459931 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
NCDN-206ENST00000459931 TGFB2P61812 414 aa21.12■□□□□ 0.97
NCDN-206ENST00000459931 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
NCDN-206ENST00000459931 A0A0G2JLW4 131 aa21.11■□□□□ 0.97
NCDN-206ENST00000459931 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
NCDN-206ENST00000459931 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
NCDN-206ENST00000459931 SENP3-EIF4A1A0A087X0R7 540 aa21.1■□□□□ 0.97
NCDN-206ENST00000459931 DNAJC10Q8IXB1 793 aa21.1■□□□□ 0.97
NCDN-206ENST00000459931 INTS5Q6P9B9 1019 aaKnown RBP21.09■□□□□ 0.97
NCDN-206ENST00000459931 SRP68Q9UHB9 627 aaKnown RBP21.09■□□□□ 0.97
NCDN-206ENST00000459931 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
NCDN-206ENST00000459931 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
NCDN-206ENST00000459931 MYH14Q7Z406 1995 aaKnown RBP21.07■□□□□ 0.96
NCDN-206ENST00000459931 ZPR1O75312 459 aa21.07■□□□□ 0.96
NCDN-206ENST00000459931 FKBP8Q14318 412 aa21.07■□□□□ 0.96
NCDN-206ENST00000459931 GPBP1L1Q9HC44 474 aaPredicted RBP21.07■□□□□ 0.96
NCDN-206ENST00000459931 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
NCDN-206ENST00000459931 CICQ96RK0 1608 aaPredicted RBP21.07■□□□□ 0.96
NCDN-206ENST00000459931 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
NCDN-206ENST00000459931 ATP10DQ9P241 1426 aa21.06■□□□□ 0.96
NCDN-206ENST00000459931 DPEP1P16444 411 aa21.06■□□□□ 0.96
NCDN-206ENST00000459931 ZNF526Q8TF50 670 aaPredicted RBP21.06■□□□□ 0.96
NCDN-206ENST00000459931 CYP19A1P11511 503 aaPredicted RBP21.05■□□□□ 0.96
NCDN-206ENST00000459931 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
NCDN-206ENST00000459931 TTC5Q8N0Z6 440 aa21.04■□□□□ 0.96
NCDN-206ENST00000459931 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
NCDN-206ENST00000459931 PXDNLA1KZ92 1463 aa21.04■□□□□ 0.96
NCDN-206ENST00000459931 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 TEFQ10587 303 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 VSIG10Q8N0Z9 540 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
NCDN-206ENST00000459931 FCHSD2O94868 740 aa21.02■□□□□ 0.96
NCDN-206ENST00000459931 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.95
NCDN-206ENST00000459931 DDR1Q08345 913 aa21.01■□□□□ 0.95
NCDN-206ENST00000459931 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
NCDN-206ENST00000459931 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
NCDN-206ENST00000459931 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
NCDN-206ENST00000459931 MRC1P22897 1456 aa21.01■□□□□ 0.95
NCDN-206ENST00000459931 STARD3NLO95772 234 aa21■□□□□ 0.95
NCDN-206ENST00000459931 CANXP27824 592 aaKnown RBP21■□□□□ 0.95
NCDN-206ENST00000459931 TM4SF1P30408 202 aa21■□□□□ 0.95
NCDN-206ENST00000459931 PIM2Q9P1W9 311 aa21■□□□□ 0.95
NCDN-206ENST00000459931 ZBTB1Q9Y2K1 713 aa21■□□□□ 0.95
NCDN-206ENST00000459931 TJP1Q07157 1748 aa21■□□□□ 0.95
NCDN-206ENST00000459931 COL3A1P02461 1466 aaPredicted RBP21■□□□□ 0.95
NCDN-206ENST00000459931 ADCY9O60503 1353 aa20.99■□□□□ 0.95
NCDN-206ENST00000459931 KCNA3P22001 575 aa20.99■□□□□ 0.95
NCDN-206ENST00000459931 NARFQ9UHQ1 456 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms