RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 NLGN1Q8N2Q7 840 aa23.19■■□□□ 1.3
TMEM50B-205ENST00000459909 TMOD3Q9NYL9 352 aa23.19■■□□□ 1.3
TMEM50B-205ENST00000459909 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
TMEM50B-205ENST00000459909 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
TMEM50B-205ENST00000459909 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
TMEM50B-205ENST00000459909 C10orf71Q711Q0 1435 aa23.18■■□□□ 1.3
TMEM50B-205ENST00000459909 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 TONSLQ96HA7 1378 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 PLEKHG2Q9H7P9 1386 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 FCHSD2O94868 740 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 ASAP1Q9ULH1 1129 aa23.17■■□□□ 1.3
TMEM50B-205ENST00000459909 PKD1L3Q7Z443 1732 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 DPEP1P16444 411 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 TMF1P82094 1093 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 HTRA3P83110 453 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 TRAPPC3LQ5T215 181 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 CCDC87Q9NVE4 849 aa23.16■■□□□ 1.3
TMEM50B-205ENST00000459909 C9orf131Q5VYM1 1079 aa23.15■■□□□ 1.3
TMEM50B-205ENST00000459909 RTCBQ9Y3I0 505 aaKnown RBP23.15■■□□□ 1.3
TMEM50B-205ENST00000459909 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
TMEM50B-205ENST00000459909 CAPN15O75808 1086 aa23.14■■□□□ 1.29
TMEM50B-205ENST00000459909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.292e-6■□□□□ 10.3
TMEM50B-205ENST00000459909 TNS4Q8IZW8 715 aa23.13■■□□□ 1.29
TMEM50B-205ENST00000459909 N4BP2Q86UW6 1770 aaPredicted RBP23.13■■□□□ 1.29
TMEM50B-205ENST00000459909 KDM2BQ8NHM5 1336 aa23.12■■□□□ 1.29
TMEM50B-205ENST00000459909 ADRA2BP18089 450 aa23.12■■□□□ 1.29
TMEM50B-205ENST00000459909 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
TMEM50B-205ENST00000459909 PRELPP51888 382 aa23.11■■□□□ 1.29
TMEM50B-205ENST00000459909 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
TMEM50B-205ENST00000459909 IFNL2Q8IZJ0 200 aa23.1■■□□□ 1.29
TMEM50B-205ENST00000459909 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
TMEM50B-205ENST00000459909 EMILIN1Q9Y6C2 1016 aa23.1■■□□□ 1.29
TMEM50B-205ENST00000459909 GYS1P13807 737 aa23.09■■□□□ 1.29
TMEM50B-205ENST00000459909 PHKG2P15735 406 aa23.09■■□□□ 1.29
TMEM50B-205ENST00000459909 KCNA3P22001 575 aa23.09■■□□□ 1.29
TMEM50B-205ENST00000459909 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
TMEM50B-205ENST00000459909 PIM2Q9P1W9 311 aa23.08■■□□□ 1.29
TMEM50B-205ENST00000459909 KDRP35968 1356 aa23.08■■□□□ 1.29
TMEM50B-205ENST00000459909 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.28
TMEM50B-205ENST00000459909 RFC4P35249 363 aa23.07■■□□□ 1.28
TMEM50B-205ENST00000459909 DCAF5Q96JK2 942 aa23.07■■□□□ 1.28
TMEM50B-205ENST00000459909 C4AP0C0L4 1744 aa23.07■■□□□ 1.28
TMEM50B-205ENST00000459909 RRAGCQ9HB90 399 aa23.06■■□□□ 1.28
TMEM50B-205ENST00000459909 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
TMEM50B-205ENST00000459909 CNTNAP4Q9C0A0 1308 aa23.06■■□□□ 1.28
TMEM50B-205ENST00000459909 DALRD3Q5D0E6 543 aaKnown RBP23.05■■□□□ 1.28
TMEM50B-205ENST00000459909 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
TMEM50B-205ENST00000459909 SLC4A9Q96Q91 983 aa23.05■■□□□ 1.28
TMEM50B-205ENST00000459909 EYA1Q99502 592 aa23.05■■□□□ 1.28
TMEM50B-205ENST00000459909 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
TMEM50B-205ENST00000459909 RPS6KA4O75676 772 aa23.04■■□□□ 1.28
TMEM50B-205ENST00000459909 BRCA1P38398 1863 aaKnown RBP23.04■■□□□ 1.28
TMEM50B-205ENST00000459909 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
TMEM50B-205ENST00000459909 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
TMEM50B-205ENST00000459909 KIF20BQ96Q89 1820 aa23.02■■□□□ 1.28
TMEM50B-205ENST00000459909 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
TMEM50B-205ENST00000459909 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
TMEM50B-205ENST00000459909 TIMELESSQ9UNS1 1208 aa23.01■■□□□ 1.27
TMEM50B-205ENST00000459909 ZNF831Q5JPB2 1677 aa23■■□□□ 1.27
TMEM50B-205ENST00000459909 TNRC6CQ9HCJ0 1690 aaKnown RBP22.98■■□□□ 1.27
TMEM50B-205ENST00000459909 CDCA8Q53HL2 280 aa22.98■■□□□ 1.27
TMEM50B-205ENST00000459909 ZC3H4Q9UPT8 1303 aaKnown RBP22.98■■□□□ 1.27
TMEM50B-205ENST00000459909 PCNTO95613 3336 aa22.97■■□□□ 1.27
TMEM50B-205ENST00000459909 HSPA1AP0DMV8 641 aaKnown RBP22.97■■□□□ 1.27
TMEM50B-205ENST00000459909 HSPA1BP0DMV9 641 aaKnown RBP22.97■■□□□ 1.27
TMEM50B-205ENST00000459909 CARD14Q9BXL6 1004 aa22.97■■□□□ 1.27
TMEM50B-205ENST00000459909 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
TMEM50B-205ENST00000459909 CHRNA5P30532 468 aa22.95■■□□□ 1.26
TMEM50B-205ENST00000459909 DDR1Q08345 913 aa22.95■■□□□ 1.26
TMEM50B-205ENST00000459909 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
TMEM50B-205ENST00000459909 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
TMEM50B-205ENST00000459909 FKBP8Q14318 412 aa22.94■■□□□ 1.26
TMEM50B-205ENST00000459909 USP42Q9H9J4 1324 aaKnown RBP22.93■■□□□ 1.26
TMEM50B-205ENST00000459909 VEGFAP15692 232 aaPredicted RBP22.93■■□□□ 1.26
TMEM50B-205ENST00000459909 SRP68Q9UHB9 627 aaKnown RBP22.93■■□□□ 1.26
TMEM50B-205ENST00000459909 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
TMEM50B-205ENST00000459909 CABP4P57796 275 aa22.92■■□□□ 1.26
TMEM50B-205ENST00000459909 POLKQ9UBT6 870 aa22.92■■□□□ 1.26
TMEM50B-205ENST00000459909 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
TMEM50B-205ENST00000459909 KDM6AO15550 1401 aaPredicted RBP22.91■■□□□ 1.26
TMEM50B-205ENST00000459909 LMNB1P20700 586 aa22.9■■□□□ 1.26
TMEM50B-205ENST00000459909 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
TMEM50B-205ENST00000459909 POLRMTO00411 1230 aaKnown RBP22.89■■□□□ 1.25
TMEM50B-205ENST00000459909 RASSF7Q02833 373 aa22.89■■□□□ 1.25
TMEM50B-205ENST00000459909 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
TMEM50B-205ENST00000459909 TM4SF1P30408 202 aa22.88■■□□□ 1.25
TMEM50B-205ENST00000459909 PLEKHO1Q53GL0 409 aaPredicted RBP22.88■■□□□ 1.25
TMEM50B-205ENST00000459909 MYH14Q7Z406 1995 aaKnown RBP22.87■■□□□ 1.25
TMEM50B-205ENST00000459909 SBF1O95248 1867 aa22.87■■□□□ 1.25
TMEM50B-205ENST00000459909 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
TMEM50B-205ENST00000459909 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
TMEM50B-205ENST00000459909 ZPR1O75312 459 aa22.84■■□□□ 1.25
TMEM50B-205ENST00000459909 MTHFSP49914 203 aa22.84■■□□□ 1.25
TMEM50B-205ENST00000459909 INTS5Q6P9B9 1019 aaKnown RBP22.82■■□□□ 1.24
TMEM50B-205ENST00000459909 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
TMEM50B-205ENST00000459909 USPL1Q5W0Q7 1092 aa22.81■■□□□ 1.24
TMEM50B-205ENST00000459909 TTLL6Q8N841 843 aa22.81■■□□□ 1.24
TMEM50B-205ENST00000459909 C1orf141Q5JVX7 400 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms