RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ATP6V1AP38606 617 aa14.41□□□□□ -0.1
HDLBP-227ENST00000458564 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
HDLBP-227ENST00000458564 ATG3Q9NT62 314 aa14.41□□□□□ -0.1
HDLBP-227ENST00000458564 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-227ENST00000458564 ERVV-2B6SEH9 535 aa14.39□□□□□ -0.11
HDLBP-227ENST00000458564 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
HDLBP-227ENST00000458564 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
HDLBP-227ENST00000458564 HSP90AB1P08238 724 aaKnown RBP14.38□□□□□ -0.11
HDLBP-227ENST00000458564 ADRA2BP18089 450 aa14.38□□□□□ -0.11
HDLBP-227ENST00000458564 DCAF5Q96JK2 942 aa14.38□□□□□ -0.11
HDLBP-227ENST00000458564 MMP10P09238 476 aa14.37□□□□□ -0.11
HDLBP-227ENST00000458564 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
HDLBP-227ENST00000458564 SLC4A9Q96Q91 983 aa14.37□□□□□ -0.11
HDLBP-227ENST00000458564 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
HDLBP-227ENST00000458564 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
HDLBP-227ENST00000458564 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
HDLBP-227ENST00000458564 COL5A3P25940 1745 aaPredicted RBP14.37□□□□□ -0.11
HDLBP-227ENST00000458564 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
HDLBP-227ENST00000458564 CNTNAP4Q9C0A0 1308 aa14.37□□□□□ -0.11
HDLBP-227ENST00000458564 TNNT2P45379 298 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-227ENST00000458564 NLGN1Q8N2Q7 840 aa14.36□□□□□ -0.11
HDLBP-227ENST00000458564 TGFB2P61812 414 aa14.35□□□□□ -0.11
HDLBP-227ENST00000458564 AMOTQ4VCS5 1084 aa14.35□□□□□ -0.11
HDLBP-227ENST00000458564 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
HDLBP-227ENST00000458564 HSPA6P17066 643 aa14.34□□□□□ -0.11
HDLBP-227ENST00000458564 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-227ENST00000458564 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
HDLBP-227ENST00000458564 RPS6KA4O75676 772 aa14.33□□□□□ -0.12
HDLBP-227ENST00000458564 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-227ENST00000458564 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.12
HDLBP-227ENST00000458564 KIF3CO14782 793 aa14.32□□□□□ -0.12
HDLBP-227ENST00000458564 GYS1P13807 737 aa14.32□□□□□ -0.12
HDLBP-227ENST00000458564 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDLBP-227ENST00000458564 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-227ENST00000458564 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
HDLBP-227ENST00000458564 POLR3GLQ9BT43 218 aa14.32□□□□□ -0.12
HDLBP-227ENST00000458564 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
HDLBP-227ENST00000458564 PANK3Q9H999 370 aa14.32□□□□□ -0.12
HDLBP-227ENST00000458564 CABP4P57796 275 aa14.31□□□□□ -0.12
HDLBP-227ENST00000458564 CCDC87Q9NVE4 849 aa14.31□□□□□ -0.12
HDLBP-227ENST00000458564 MYH14Q7Z406 1995 aaKnown RBP14.31□□□□□ -0.12
HDLBP-227ENST00000458564 HSPA5P11021 654 aaKnown RBP14.3□□□□□ -0.12
HDLBP-227ENST00000458564 RFC4P35249 363 aa14.3□□□□□ -0.12
HDLBP-227ENST00000458564 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
HDLBP-227ENST00000458564 N4BP2Q86UW6 1770 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-227ENST00000458564 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
HDLBP-227ENST00000458564 MTHFSP49914 203 aa14.29□□□□□ -0.12
HDLBP-227ENST00000458564 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
HDLBP-227ENST00000458564 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
HDLBP-227ENST00000458564 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
HDLBP-227ENST00000458564 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
HDLBP-227ENST00000458564 MORC1Q86VD1 984 aa14.28□□□□□ -0.12
HDLBP-227ENST00000458564 USP42Q9H9J4 1324 aaKnown RBP14.28□□□□□ -0.12
HDLBP-227ENST00000458564 PARP3Q9Y6F1 533 aa14.28□□□□□ -0.12
HDLBP-227ENST00000458564 TJP1Q07157 1748 aa14.27□□□□□ -0.12
HDLBP-227ENST00000458564 MRC1P22897 1456 aa14.27□□□□□ -0.12
HDLBP-227ENST00000458564 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.13
HDLBP-227ENST00000458564 DPEP1P16444 411 aa14.27□□□□□ -0.13
HDLBP-227ENST00000458564 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
HDLBP-227ENST00000458564 KCNA3P22001 575 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 IL13P35225 146 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 SCN11AQ9UI33 1791 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
HDLBP-227ENST00000458564 ARFGEF1Q9Y6D6 1849 aa14.25□□□□□ -0.13
HDLBP-227ENST00000458564 FCHSD2O94868 740 aa14.25□□□□□ -0.13
HDLBP-227ENST00000458564 TOMM70O94826 608 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 DDR1Q08345 913 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 FKBP8Q14318 412 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
HDLBP-227ENST00000458564 APLP1P51693 650 aa14.23□□□□□ -0.13
HDLBP-227ENST00000458564 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-227ENST00000458564 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
HDLBP-227ENST00000458564 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
HDLBP-227ENST00000458564 SLC52A2Q9HAB3 445 aa14.23□□□□□ -0.13
HDLBP-227ENST00000458564 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
HDLBP-227ENST00000458564 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
HDLBP-227ENST00000458564 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-227ENST00000458564 POLRMTO00411 1230 aaKnown RBP14.21□□□□□ -0.13
HDLBP-227ENST00000458564 TM4SF1P30408 202 aa14.21□□□□□ -0.13
HDLBP-227ENST00000458564 DALRD3Q5D0E6 543 aaKnown RBP14.21□□□□□ -0.13
HDLBP-227ENST00000458564 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
HDLBP-227ENST00000458564 KCPQ6ZWJ8 1503 aa14.2□□□□□ -0.14
HDLBP-227ENST00000458564 C9orf131Q5VYM1 1079 aa14.2□□□□□ -0.14
HDLBP-227ENST00000458564 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
HDLBP-227ENST00000458564 CYP19A1P11511 503 aaPredicted RBP14.19□□□□□ -0.14
HDLBP-227ENST00000458564 RBM46Q8TBY0 533 aaKnown RBP14.19□□□□□ -0.14
HDLBP-227ENST00000458564 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
HDLBP-227ENST00000458564 ZPR1O75312 459 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 DNAJC5GQ8N7S2 189 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 COL15A1P39059 1388 aa14.18□□□□□ -0.14
HDLBP-227ENST00000458564 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
HDLBP-227ENST00000458564 CHRNA5P30532 468 aa14.17□□□□□ -0.14
HDLBP-227ENST00000458564 USPL1Q5W0Q7 1092 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms