RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 GGNBP2Q9H3C7 697 aa8.26□□□□□ -1.09
SYCP1-203ENST00000455987 BCS1LQ9Y276 419 aa8.26□□□□□ -1.09
SYCP1-203ENST00000455987 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
SYCP1-203ENST00000455987 PLEKHG2Q9H7P9 1386 aa8.26□□□□□ -1.09
SYCP1-203ENST00000455987 ITPK1Q13572 414 aa8.25□□□□□ -1.09
SYCP1-203ENST00000455987 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
SYCP1-203ENST00000455987 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
SYCP1-203ENST00000455987 ANKRD26Q9UPS8 1709 aa8.25□□□□□ -1.09
SYCP1-203ENST00000455987 A0A0G2JLW4 131 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 FSTL1Q12841 308 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYCP1-203ENST00000455987 TMOD3Q9NYL9 352 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 SPG7Q9UQ90 795 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 ST20-MTHFSA0A0A6YYL1 179 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 ASAP1Q9ULH1 1129 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
SYCP1-203ENST00000455987 SBF1O95248 1867 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 COL5A3P25940 1745 aaPredicted RBP8.24□□□□□ -1.09
SYCP1-203ENST00000455987 KDRP35968 1356 aa8.24□□□□□ -1.09
SYCP1-203ENST00000455987 DPEP1P16444 411 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 ADRA2BP18089 450 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 C16orf71Q8IYS4 520 aaPredicted RBP8.23□□□□□ -1.09
SYCP1-203ENST00000455987 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 FCHSD2O94868 740 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 TMF1P82094 1093 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
SYCP1-203ENST00000455987 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
SYCP1-203ENST00000455987 MYH14Q7Z406 1995 aaKnown RBP8.23□□□□□ -1.09
SYCP1-203ENST00000455987 HTRA3P83110 453 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 ATG3Q9NT62 314 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 KCPQ6ZWJ8 1503 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 PRELPP51888 382 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 PCNTO95613 3336 aa8.22□□□□□ -1.09
SYCP1-203ENST00000455987 GYS1P13807 737 aa8.21□□□□□ -1.09
SYCP1-203ENST00000455987 PHKG2P15735 406 aa8.21□□□□□ -1.09
SYCP1-203ENST00000455987 KCNA3P22001 575 aa8.21□□□□□ -1.09
SYCP1-203ENST00000455987 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.09
SYCP1-203ENST00000455987 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.09
SYCP1-203ENST00000455987 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.09
SYCP1-203ENST00000455987 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
SYCP1-203ENST00000455987 DCAF5Q96JK2 942 aa8.21□□□□□ -1.1
SYCP1-203ENST00000455987 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
SYCP1-203ENST00000455987 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
SYCP1-203ENST00000455987 CAPN15O75808 1086 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 PIM2Q9P1W9 311 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 EYA1Q99502 592 aa8.2□□□□□ -1.1
SYCP1-203ENST00000455987 RFC4P35249 363 aa8.19□□□□□ -1.1
SYCP1-203ENST00000455987 DALRD3Q5D0E6 543 aaKnown RBP8.19□□□□□ -1.1
SYCP1-203ENST00000455987 SMC1BQ8NDV3 1235 aa8.19□□□□□ -1.1
SYCP1-203ENST00000455987 RNF181Q9P0P0 153 aa8.19□□□□□ -1.1
SYCP1-203ENST00000455987 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
SYCP1-203ENST00000455987 RRAGCQ9HB90 399 aa8.19□□□□□ -1.1
SYCP1-203ENST00000455987 ERVV-2B6SEH9 535 aa8.18□□□□□ -1.1
SYCP1-203ENST00000455987 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
SYCP1-203ENST00000455987 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
SYCP1-203ENST00000455987 RBM42Q9BTD8 480 aaKnown RBP8.17□□□□□ -1.1
SYCP1-203ENST00000455987 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
SYCP1-203ENST00000455987 KDM6AO15550 1401 aaPredicted RBP8.17□□□□□ -1.1
SYCP1-203ENST00000455987 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
SYCP1-203ENST00000455987 HSP90AB1P08238 724 aaKnown RBP8.17□□□□□ -1.1
SYCP1-203ENST00000455987 DDR1Q08345 913 aa8.17□□□□□ -1.1
SYCP1-203ENST00000455987 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
SYCP1-203ENST00000455987 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
SYCP1-203ENST00000455987 ADAMTS7Q9UKP4 1686 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 TJP1Q07157 1748 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
SYCP1-203ENST00000455987 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
SYCP1-203ENST00000455987 FKBP8Q14318 412 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 TIAM2Q8IVF5 1701 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 AFDNP55196 1824 aaKnown RBP8.16□□□□□ -1.1
SYCP1-203ENST00000455987 CHRNA5P30532 468 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 POLKQ9UBT6 870 aa8.16□□□□□ -1.1
SYCP1-203ENST00000455987 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.1
SYCP1-203ENST00000455987 CRKLP46109 303 aaKnown RBP8.15□□□□□ -1.1
SYCP1-203ENST00000455987 SRP68Q9UHB9 627 aaKnown RBP8.15□□□□□ -1.1
SYCP1-203ENST00000455987 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
SYCP1-203ENST00000455987 GLTPD2A6NH11 291 aa8.15□□□□□ -1.11
SYCP1-203ENST00000455987 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.11
SYCP1-203ENST00000455987 LMNB1P20700 586 aa8.15□□□□□ -1.11
SYCP1-203ENST00000455987 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.11
SYCP1-203ENST00000455987 TM4SF1P30408 202 aa8.14□□□□□ -1.11
SYCP1-203ENST00000455987 CABP4P57796 275 aa8.14□□□□□ -1.11
SYCP1-203ENST00000455987 DICER1Q9UPY3 1922 aaKnown RBP8.14□□□□□ -1.11
SYCP1-203ENST00000455987 PLEKHO1Q53GL0 409 aaPredicted RBP8.14□□□□□ -1.11
SYCP1-203ENST00000455987 SCN11AQ9UI33 1791 aa8.13□□□□□ -1.11
SYCP1-203ENST00000455987 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
SYCP1-203ENST00000455987 RASSF7Q02833 373 aa8.13□□□□□ -1.11
SYCP1-203ENST00000455987 AMOTQ4VCS5 1084 aa8.13□□□□□ -1.11
SYCP1-203ENST00000455987 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
SYCP1-203ENST00000455987 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
SYCP1-203ENST00000455987 MTHFSP49914 203 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms