RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
PDXDC1-204ENST00000455313 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
PDXDC1-204ENST00000455313 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.49■■□□□ 1.03
PDXDC1-204ENST00000455313 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
PDXDC1-204ENST00000455313 SLC52A2Q9HAB3 445 aa21.48■■□□□ 1.03
PDXDC1-204ENST00000455313 THRAP3Q9Y2W1 955 aaKnown RBP21.48■■□□□ 1.03
PDXDC1-204ENST00000455313 DDX54Q8TDD1 881 aaKnown RBP21.48■■□□□ 1.03
PDXDC1-204ENST00000455313 TNS2Q63HR2 1409 aa21.47■■□□□ 1.03
PDXDC1-204ENST00000455313 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
PDXDC1-204ENST00000455313 NKX1-1Q15270 411 aaPredicted RBP21.46■■□□□ 1.03
PDXDC1-204ENST00000455313 EXOC6Q8TAG9 804 aa21.46■■□□□ 1.03
PDXDC1-204ENST00000455313 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
PDXDC1-204ENST00000455313 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
PDXDC1-204ENST00000455313 TCERG1O14776 1098 aaKnown RBP21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 KCNQ3O43525 872 aa21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 BRPF1P55201 1214 aaPredicted RBP21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 CDCA7Q9BWT1 371 aaPredicted RBP21.45■■□□□ 1.02
PDXDC1-204ENST00000455313 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
PDXDC1-204ENST00000455313 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
PDXDC1-204ENST00000455313 MEX3CQ5U5Q3 659 aaKnown RBP21.44■■□□□ 1.02
PDXDC1-204ENST00000455313 VPS72Q15906 364 aa21.44■■□□□ 1.02
PDXDC1-204ENST00000455313 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
PDXDC1-204ENST00000455313 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
PDXDC1-204ENST00000455313 TNNQ9UQP3 1299 aa21.43■■□□□ 1.02
PDXDC1-204ENST00000455313 USP21Q9UK80 565 aa21.43■■□□□ 1.02
PDXDC1-204ENST00000455313 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
PDXDC1-204ENST00000455313 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
PDXDC1-204ENST00000455313 BARGINQ6ZT62 677 aa21.42■■□□□ 1.02
PDXDC1-204ENST00000455313 PPP4R2Q9NY27 417 aa21.42■■□□□ 1.02
PDXDC1-204ENST00000455313 EXOC5O00471 708 aa21.41■■□□□ 1.02
PDXDC1-204ENST00000455313 CABP4P57796 275 aa21.41■■□□□ 1.02
PDXDC1-204ENST00000455313 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
PDXDC1-204ENST00000455313 TRIM27P14373 513 aa21.41■■□□□ 1.02
PDXDC1-204ENST00000455313 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 RLBP1P12271 317 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
PDXDC1-204ENST00000455313 SLC39A6Q13433 755 aa21.39■■□□□ 1.01
PDXDC1-204ENST00000455313 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
PDXDC1-204ENST00000455313 DDB1Q16531 1140 aa21.38■■□□□ 1.01
PDXDC1-204ENST00000455313 AFF2P51816 1311 aa21.38■■□□□ 1.01
PDXDC1-204ENST00000455313 HOXB7P09629 217 aa21.38■■□□□ 1.01
PDXDC1-204ENST00000455313 PAPPAQ13219 1627 aa21.38■■□□□ 1.01
PDXDC1-204ENST00000455313 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
PDXDC1-204ENST00000455313 CACNA1FO60840 1977 aa21.37■■□□□ 1.01
PDXDC1-204ENST00000455313 FAM98CQ17RN3 349 aaKnown RBP21.37■■□□□ 1.01
PDXDC1-204ENST00000455313 DZIP1LQ8IYY4 767 aaKnown RBP21.37■■□□□ 1.01
PDXDC1-204ENST00000455313 ITGB4P16144 1822 aa21.37■■□□□ 1.01
PDXDC1-204ENST00000455313 CCDC30Q5VVM6 783 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 C5P01031 1676 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 MS4A1P11836 297 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
PDXDC1-204ENST00000455313 UBR2Q8IWV8 1755 aa21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 GLI3P10071 1580 aa21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
PDXDC1-204ENST00000455313 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
PDXDC1-204ENST00000455313 STK31Q9BXU1 1019 aa21.34■■□□□ 1.01
PDXDC1-204ENST00000455313 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
PDXDC1-204ENST00000455313 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
PDXDC1-204ENST00000455313 THSD7AQ9UPZ6 1657 aa21.33■■□□□ 1.01
PDXDC1-204ENST00000455313 ZNF496Q96IT1 587 aaPredicted RBP21.33■■□□□ 1.01
PDXDC1-204ENST00000455313 ATRNO75882 1429 aa21.32■■□□□ 1
PDXDC1-204ENST00000455313 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
PDXDC1-204ENST00000455313 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
PDXDC1-204ENST00000455313 RGS12O14924 1447 aa21.32■■□□□ 1
PDXDC1-204ENST00000455313 PRAMEF22A3QJZ6 481 aa21.31■■□□□ 1
PDXDC1-204ENST00000455313 MVPQ14764 893 aaKnown RBP21.31■■□□□ 1
PDXDC1-204ENST00000455313 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
PDXDC1-204ENST00000455313 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
PDXDC1-204ENST00000455313 PTPRCP08575 1304 aa21.31■■□□□ 1
PDXDC1-204ENST00000455313 G2E3Q7L622 706 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 FMNL2Q96PY5 1086 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
PDXDC1-204ENST00000455313 ABCC4O15439 1325 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 TMEM57Q8N5G2 664 aa21.3■■□□□ 1
PDXDC1-204ENST00000455313 GJD4Q96KN9 370 aaPredicted RBP21.3■■□□□ 1
PDXDC1-204ENST00000455313 LAMB4A4D0S4 1761 aa21.29■■□□□ 1
PDXDC1-204ENST00000455313 BCL9O00512 1426 aa21.29■■□□□ 1
PDXDC1-204ENST00000455313 PIGBQ92521 554 aa21.29■■□□□ 1
PDXDC1-204ENST00000455313 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
PDXDC1-204ENST00000455313 TRPC5Q9UL62 973 aaPredicted RBP21.29■■□□□ 1
PDXDC1-204ENST00000455313 ITPRIPQ8IWB1 547 aa21.28■■□□□ 1
PDXDC1-204ENST00000455313 A0A0G2JS52 829 aa21.27■■□□□ 1
PDXDC1-204ENST00000455313 MYT1Q01538 1121 aa21.27■■□□□ 1
PDXDC1-204ENST00000455313 FLIIQ13045 1269 aa21.27■■□□□ 1
PDXDC1-204ENST00000455313 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
PDXDC1-204ENST00000455313 DDX19BQ9UMR2 479 aa21.26■□□□□ 0.99
PDXDC1-204ENST00000455313 SYTL4Q96C24 671 aaPredicted RBP21.25■□□□□ 0.99
PDXDC1-204ENST00000455313 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms