RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 COL24A1Q17RW2 1714 aa20.84■□□□□ 0.93
VCX3B-204ENST00000453306 CYP27B1O15528 508 aa20.83■□□□□ 0.93
VCX3B-204ENST00000453306 MTHFSDQ2M296 383 aaKnown RBP20.83■□□□□ 0.93
VCX3B-204ENST00000453306 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
VCX3B-204ENST00000453306 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
VCX3B-204ENST00000453306 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
VCX3B-204ENST00000453306 PALLDQ8WX93 1383 aa20.83■□□□□ 0.92
VCX3B-204ENST00000453306 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
VCX3B-204ENST00000453306 CHD4Q14839 1912 aa20.82■□□□□ 0.92
VCX3B-204ENST00000453306 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
VCX3B-204ENST00000453306 COL23A1Q86Y22 540 aaPredicted RBP20.82■□□□□ 0.92
VCX3B-204ENST00000453306 FAM9BQ8IZU0 186 aa20.8■□□□□ 0.92
VCX3B-204ENST00000453306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
VCX3B-204ENST00000453306 GRIN3BO60391 1043 aa20.79■□□□□ 0.92
VCX3B-204ENST00000453306 C5P01031 1676 aa20.78■□□□□ 0.92
VCX3B-204ENST00000453306 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
VCX3B-204ENST00000453306 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
VCX3B-204ENST00000453306 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
VCX3B-204ENST00000453306 NLGN2Q8NFZ4 835 aa20.78■□□□□ 0.92
VCX3B-204ENST00000453306 AK7Q96M32 723 aa20.78■□□□□ 0.92
VCX3B-204ENST00000453306 PKD1L3Q7Z443 1732 aa20.76■□□□□ 0.91
VCX3B-204ENST00000453306 PHKG2P15735 406 aa20.76■□□□□ 0.91
VCX3B-204ENST00000453306 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
VCX3B-204ENST00000453306 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
VCX3B-204ENST00000453306 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
VCX3B-204ENST00000453306 PIGBQ92521 554 aa20.75■□□□□ 0.91
VCX3B-204ENST00000453306 RUNDC1Q96C34 613 aa20.75■□□□□ 0.91
VCX3B-204ENST00000453306 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
VCX3B-204ENST00000453306 TMOD3Q9NYL9 352 aa20.74■□□□□ 0.91
VCX3B-204ENST00000453306 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
VCX3B-204ENST00000453306 PLEKHG2Q9H7P9 1386 aa20.73■□□□□ 0.91
VCX3B-204ENST00000453306 APAF1O14727 1248 aa20.73■□□□□ 0.91
VCX3B-204ENST00000453306 C1QTNF8P60827 252 aa20.73■□□□□ 0.91
VCX3B-204ENST00000453306 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
VCX3B-204ENST00000453306 TMPOP42166 694 aaKnown RBP20.72■□□□□ 0.91
VCX3B-204ENST00000453306 LGR6Q9HBX8 967 aa20.72■□□□□ 0.91
VCX3B-204ENST00000453306 C4BP0C0L5 1744 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 LOC102724428A0A0B4J2F2 783 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 SIK1P57059 783 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 IL17REQ8NFR9 667 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 ITGB4P16144 1822 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
VCX3B-204ENST00000453306 SSFA2P28290 1259 aa20.7■□□□□ 0.9
VCX3B-204ENST00000453306 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
VCX3B-204ENST00000453306 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
VCX3B-204ENST00000453306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
VCX3B-204ENST00000453306 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
VCX3B-204ENST00000453306 PHF14O94880 888 aa20.69■□□□□ 0.9
VCX3B-204ENST00000453306 YBX3P16989 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
VCX3B-204ENST00000453306 DCTN1Q14203 1278 aa20.69■□□□□ 0.9
VCX3B-204ENST00000453306 GAS2L2Q8NHY3 880 aa20.69■□□□□ 0.9
VCX3B-204ENST00000453306 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
VCX3B-204ENST00000453306 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
VCX3B-204ENST00000453306 NEUROD2Q15784 382 aa20.67■□□□□ 0.9
VCX3B-204ENST00000453306 THUMPD2Q9BTF0 503 aaKnown RBP20.67■□□□□ 0.9
VCX3B-204ENST00000453306 MAPK8IP3Q9UPT6 1336 aa20.67■□□□□ 0.9
VCX3B-204ENST00000453306 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
VCX3B-204ENST00000453306 GNAT3A8MTJ3 354 aa20.66■□□□□ 0.9
VCX3B-204ENST00000453306 RNMTO43148 476 aaKnown RBP20.66■□□□□ 0.9
VCX3B-204ENST00000453306 HSP90AB1P08238 724 aaKnown RBP20.66■□□□□ 0.9
VCX3B-204ENST00000453306 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
VCX3B-204ENST00000453306 RIPK4P57078 832 aa20.66■□□□□ 0.9
VCX3B-204ENST00000453306 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
VCX3B-204ENST00000453306 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
VCX3B-204ENST00000453306 MCM10Q7L590 875 aa20.65■□□□□ 0.9
VCX3B-204ENST00000453306 LINC00116Q8NCU8 138 aa20.65■□□□□ 0.9
VCX3B-204ENST00000453306 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.89
VCX3B-204ENST00000453306 GNPATO15228 680 aa20.64■□□□□ 0.89
VCX3B-204ENST00000453306 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
VCX3B-204ENST00000453306 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
VCX3B-204ENST00000453306 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
VCX3B-204ENST00000453306 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
VCX3B-204ENST00000453306 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
VCX3B-204ENST00000453306 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
VCX3B-204ENST00000453306 NEFMP07197 916 aa20.61■□□□□ 0.89
VCX3B-204ENST00000453306 ITPK1Q13572 414 aa20.61■□□□□ 0.89
VCX3B-204ENST00000453306 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
VCX3B-204ENST00000453306 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
VCX3B-204ENST00000453306 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
VCX3B-204ENST00000453306 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
VCX3B-204ENST00000453306 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
VCX3B-204ENST00000453306 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
VCX3B-204ENST00000453306 SLC52A2Q9HAB3 445 aa20.58■□□□□ 0.89
VCX3B-204ENST00000453306 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.88
VCX3B-204ENST00000453306 ADRA2BP18089 450 aa20.57■□□□□ 0.88
VCX3B-204ENST00000453306 CABP4P57796 275 aa20.57■□□□□ 0.88
VCX3B-204ENST00000453306 WWC1Q8IX03 1113 aa20.57■□□□□ 0.88
VCX3B-204ENST00000453306 RC3H1Q5TC82 1133 aaKnown RBP20.56■□□□□ 0.88
VCX3B-204ENST00000453306 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
VCX3B-204ENST00000453306 ATP10DQ9P241 1426 aa20.55■□□□□ 0.88
VCX3B-204ENST00000453306 KCNQ3O43525 872 aa20.55■□□□□ 0.88
VCX3B-204ENST00000453306 MMP10P09238 476 aa20.55■□□□□ 0.88
VCX3B-204ENST00000453306 CCDC27Q2M243 656 aa20.55■□□□□ 0.88
VCX3B-204ENST00000453306 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
VCX3B-204ENST00000453306 RTF1Q92541 710 aaKnown RBP20.55■□□□□ 0.88
VCX3B-204ENST00000453306 GPBP1L1Q9HC44 474 aaPredicted RBP20.55■□□□□ 0.88
VCX3B-204ENST00000453306 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
VCX3B-204ENST00000453306 ZNF521Q96K83 1311 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms