RNA–Protein interactions for RNA: ENST00000452771.5

DKC1-206, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-206ENST00000452771 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
DKC1-206ENST00000452771 ITGB4P16144 1822 aa13.05□□□□□ -0.32
DKC1-206ENST00000452771 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
DKC1-206ENST00000452771 SSFA2P28290 1259 aa13.05□□□□□ -0.32
DKC1-206ENST00000452771 UTRNP46939 3433 aa13.05□□□□□ -0.32
DKC1-206ENST00000452771 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
DKC1-206ENST00000452771 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
DKC1-206ENST00000452771 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
DKC1-206ENST00000452771 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
DKC1-206ENST00000452771 CHD4Q14839 1912 aa13.03□□□□□ -0.32
DKC1-206ENST00000452771 CABP4P57796 275 aa13.03□□□□□ -0.32
DKC1-206ENST00000452771 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
DKC1-206ENST00000452771 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
DKC1-206ENST00000452771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
DKC1-206ENST00000452771 MTHFSP49914 203 aa13.02□□□□□ -0.33
DKC1-206ENST00000452771 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
DKC1-206ENST00000452771 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
DKC1-206ENST00000452771 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
DKC1-206ENST00000452771 PHF14O94880 888 aa13.01□□□□□ -0.33
DKC1-206ENST00000452771 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
DKC1-206ENST00000452771 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
DKC1-206ENST00000452771 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
DKC1-206ENST00000452771 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
DKC1-206ENST00000452771 GNPATO15228 680 aa13□□□□□ -0.33
DKC1-206ENST00000452771 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
DKC1-206ENST00000452771 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
DKC1-206ENST00000452771 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
DKC1-206ENST00000452771 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
DKC1-206ENST00000452771 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
DKC1-206ENST00000452771 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
DKC1-206ENST00000452771 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
DKC1-206ENST00000452771 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
DKC1-206ENST00000452771 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
DKC1-206ENST00000452771 IL13P35225 146 aa12.98□□□□□ -0.33
DKC1-206ENST00000452771 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
DKC1-206ENST00000452771 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
DKC1-206ENST00000452771 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
DKC1-206ENST00000452771 ITPK1Q13572 414 aa12.97□□□□□ -0.33
DKC1-206ENST00000452771 KDRP35968 1356 aa12.96□□□□□ -0.33
DKC1-206ENST00000452771 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
DKC1-206ENST00000452771 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
DKC1-206ENST00000452771 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
DKC1-206ENST00000452771 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
DKC1-206ENST00000452771 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
DKC1-206ENST00000452771 RFC4P35249 363 aa12.95□□□□□ -0.34
DKC1-206ENST00000452771 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
DKC1-206ENST00000452771 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
DKC1-206ENST00000452771 ZNF831Q5JPB2 1677 aa12.95□□□□□ -0.34
DKC1-206ENST00000452771 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
DKC1-206ENST00000452771 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
DKC1-206ENST00000452771 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
DKC1-206ENST00000452771 CAPN15O75808 1086 aa12.93□□□□□ -0.34
DKC1-206ENST00000452771 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
DKC1-206ENST00000452771 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
DKC1-206ENST00000452771 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
DKC1-206ENST00000452771 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
DKC1-206ENST00000452771 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
DKC1-206ENST00000452771 MMP10P09238 476 aa12.92□□□□□ -0.34
DKC1-206ENST00000452771 TGFB2P61812 414 aa12.92□□□□□ -0.34
DKC1-206ENST00000452771 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
DKC1-206ENST00000452771 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
DKC1-206ENST00000452771 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
DKC1-206ENST00000452771 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
DKC1-206ENST00000452771 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
DKC1-206ENST00000452771 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
DKC1-206ENST00000452771 HMOX1P09601 288 aa12.9□□□□□ -0.34
DKC1-206ENST00000452771 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
DKC1-206ENST00000452771 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
DKC1-206ENST00000452771 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
DKC1-206ENST00000452771 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
DKC1-206ENST00000452771 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
DKC1-206ENST00000452771 GYS1P13807 737 aa12.88□□□□□ -0.35
DKC1-206ENST00000452771 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
DKC1-206ENST00000452771 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
DKC1-206ENST00000452771 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
DKC1-206ENST00000452771 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
DKC1-206ENST00000452771 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
DKC1-206ENST00000452771 ZPR1O75312 459 aa12.87□□□□□ -0.35
DKC1-206ENST00000452771 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
DKC1-206ENST00000452771 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
DKC1-206ENST00000452771 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
DKC1-206ENST00000452771 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
DKC1-206ENST00000452771 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
DKC1-206ENST00000452771 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
DKC1-206ENST00000452771 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
DKC1-206ENST00000452771 STARD3NLO95772 234 aa12.85□□□□□ -0.35
DKC1-206ENST00000452771 TEFQ10587 303 aa12.85□□□□□ -0.35
DKC1-206ENST00000452771 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
DKC1-206ENST00000452771 USP42Q9H9J4 1324 aaKnown RBP12.85□□□□□ -0.35
DKC1-206ENST00000452771 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
DKC1-206ENST00000452771 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
DKC1-206ENST00000452771 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
DKC1-206ENST00000452771 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
DKC1-206ENST00000452771 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
DKC1-206ENST00000452771 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
DKC1-206ENST00000452771 A0A087WZG4 1122 aa12.83□□□□□ -0.36
DKC1-206ENST00000452771 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
DKC1-206ENST00000452771 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
DKC1-206ENST00000452771 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
DKC1-206ENST00000452771 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms