RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
PMS1-218ENST00000452382 CALR3Q96L12 384 aaKnown RBP8.06□□□□□ -1.12
PMS1-218ENST00000452382 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
PMS1-218ENST00000452382 ARID3CA6NKF2 412 aa8.05□□□□□ -1.12
PMS1-218ENST00000452382 DBN1Q16643 649 aa8.05□□□□□ -1.12
PMS1-218ENST00000452382 RIPOR1Q6ZS17 1223 aa8.05□□□□□ -1.12
PMS1-218ENST00000452382 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
PMS1-218ENST00000452382 GAS2L1Q99501 681 aaPredicted RBP8.05□□□□□ -1.12
PMS1-218ENST00000452382 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
PMS1-218ENST00000452382 SKIP12755 728 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 PHKA2P46019 1235 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 GAS6Q14393 721 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 WDR44Q5JSH3 913 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 TBC1D9Q6ZT07 1266 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 PLEKHM2Q8IWE5 1019 aa8.04□□□□□ -1.12
PMS1-218ENST00000452382 GPR25O00155 361 aa8.03□□□□□ -1.12
PMS1-218ENST00000452382 ATP9BO43861 1147 aa8.03□□□□□ -1.12
PMS1-218ENST00000452382 GDF10P55107 478 aa8.03□□□□□ -1.12
PMS1-218ENST00000452382 TLR1Q15399 786 aa8.03□□□□□ -1.12
PMS1-218ENST00000452382 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
PMS1-218ENST00000452382 INHAP05111 366 aa8.02□□□□□ -1.13
PMS1-218ENST00000452382 C4orf17Q53FE4 359 aa8.02□□□□□ -1.13
PMS1-218ENST00000452382 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
PMS1-218ENST00000452382 TMEM214Q6NUQ4 689 aaKnown RBP8.02□□□□□ -1.13
PMS1-218ENST00000452382 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
PMS1-218ENST00000452382 PALM3A6NDB9 673 aaPredicted RBP8.01□□□□□ -1.13
PMS1-218ENST00000452382 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 TMEM229AB2RXF0 380 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
PMS1-218ENST00000452382 F11P03951 625 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 THBS1P07996 1170 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 NCOA4Q13772 614 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 EML3Q32P44 896 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 GNASQ5JWF2 1037 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 GMCL1Q96IK5 515 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 PCDHGA11Q9Y5H2 935 aa8.01□□□□□ -1.13
PMS1-218ENST00000452382 SLURP2P0DP57 97 aa8□□□□□ -1.13
PMS1-218ENST00000452382 PPARGC1BQ86YN6 1023 aaKnown RBP8□□□□□ -1.13
PMS1-218ENST00000452382 RHBDD1Q8TEB9 315 aa8□□□□□ -1.13
PMS1-218ENST00000452382 WHAMMQ8TF30 809 aa8□□□□□ -1.13
PMS1-218ENST00000452382 GTPBP3Q969Y2 492 aaKnown RBP8□□□□□ -1.13
PMS1-218ENST00000452382 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
PMS1-218ENST00000452382 A0A1B0GTH6 734 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 USP17L3A6NCW0 530 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 USP17L4A6NCW7 530 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 H7C1W4 665 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
PMS1-218ENST00000452382 ZNF385CQ66K41 422 aaPredicted RBP7.99□□□□□ -1.13
PMS1-218ENST00000452382 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 USP17L1Q7RTZ2 530 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 NUCKS1Q9H1E3 243 aaKnown RBP7.99□□□□□ -1.13
PMS1-218ENST00000452382 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
PMS1-218ENST00000452382 SUPT5HO00267 1087 aaKnown RBP7.98□□□□□ -1.13
PMS1-218ENST00000452382 ADAMTS2O95450 1211 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 GTF2IP78347 998 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 SRPK2P78362 688 aaKnown RBP7.98□□□□□ -1.13
PMS1-218ENST00000452382 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 USP3Q9Y6I4 520 aa7.98□□□□□ -1.13
PMS1-218ENST00000452382 PLA2G4AP47712 749 aa7.97□□□□□ -1.13
PMS1-218ENST00000452382 SMTNP53814 917 aa7.97□□□□□ -1.13
PMS1-218ENST00000452382 SRSF11Q05519 484 aaKnown RBP7.97□□□□□ -1.13
PMS1-218ENST00000452382 SVOPQ8N4V2 548 aa7.97□□□□□ -1.13
PMS1-218ENST00000452382 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
PMS1-218ENST00000452382 MSX1P28360 303 aa7.96□□□□□ -1.14
PMS1-218ENST00000452382 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
PMS1-218ENST00000452382 FOXR1Q6PIV2 292 aa7.96□□□□□ -1.14
PMS1-218ENST00000452382 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
PMS1-218ENST00000452382 SLC4A9Q96Q91 983 aa7.96□□□□□ -1.14
PMS1-218ENST00000452382 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
PMS1-218ENST00000452382 IQSEC3Q9UPP2 1182 aaPredicted RBP7.96□□□□□ -1.14
PMS1-218ENST00000452382 PSME1Q06323 249 aa7.95□□□□□ -1.14
PMS1-218ENST00000452382 UBAP2LQ14157 1087 aaKnown RBP7.95□□□□□ -1.14
PMS1-218ENST00000452382 MTFR1Q15390 333 aa7.95□□□□□ -1.14
PMS1-218ENST00000452382 A6NJY4 79 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 DKK1O94907 266 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 ATP4AP20648 1035 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 LYPD4Q6UWN0 246 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.94□□□□□ -1.14
PMS1-218ENST00000452382 CCDC97Q96F63 343 aaPredicted RBP7.94□□□□□ -1.14
PMS1-218ENST00000452382 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 ZNF358Q9NW07 568 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 KIAA1024Q9UPX6 916 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 IGF1RP08069 1367 aa7.94□□□□□ -1.14
PMS1-218ENST00000452382 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
PMS1-218ENST00000452382 CLDN10P78369 228 aa7.93□□□□□ -1.14
PMS1-218ENST00000452382 NIFKQ9BYG3 293 aaKnown RBP7.93□□□□□ -1.14
PMS1-218ENST00000452382 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
PMS1-218ENST00000452382 ZBTB7BO15156 539 aaPredicted RBP7.92□□□□□ -1.14
PMS1-218ENST00000452382 ARHGEF15O94989 841 aa7.92□□□□□ -1.14
PMS1-218ENST00000452382 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
PMS1-218ENST00000452382 MX2P20592 715 aa7.92□□□□□ -1.14
PMS1-218ENST00000452382 PGBD3Q8N328 593 aa7.92□□□□□ -1.14
PMS1-218ENST00000452382 CRISPLD1Q9H336 500 aa7.92□□□□□ -1.14
PMS1-218ENST00000452382 MKRN1Q9UHC7 482 aaKnown RBP7.92□□□□□ -1.14
PMS1-218ENST00000452382 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
PMS1-218ENST00000452382 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms