RNA–Protein interactions for RNA: ENST00000451554.1

CCDC148-206, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-206ENST00000451554 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
CCDC148-206ENST00000451554 ITPK1Q13572 414 aa20.33■□□□□ 0.85
CCDC148-206ENST00000451554 COL5A3P25940 1745 aaPredicted RBP20.33■□□□□ 0.85
CCDC148-206ENST00000451554 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.84
CCDC148-206ENST00000451554 GNPATO15228 680 aa20.32■□□□□ 0.84
CCDC148-206ENST00000451554 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
CCDC148-206ENST00000451554 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
CCDC148-206ENST00000451554 BRCA1P38398 1863 aaKnown RBP20.32■□□□□ 0.84
CCDC148-206ENST00000451554 PXDNLA1KZ92 1463 aa20.32■□□□□ 0.84
CCDC148-206ENST00000451554 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
CCDC148-206ENST00000451554 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
CCDC148-206ENST00000451554 EYA1Q99502 592 aa20.3■□□□□ 0.84
CCDC148-206ENST00000451554 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
CCDC148-206ENST00000451554 C4AP0C0L4 1744 aa20.3■□□□□ 0.84
CCDC148-206ENST00000451554 KIF3CO14782 793 aa20.3■□□□□ 0.84
CCDC148-206ENST00000451554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCDC148-206ENST00000451554 PHKG2P15735 406 aa20.29■□□□□ 0.84
CCDC148-206ENST00000451554 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
CCDC148-206ENST00000451554 KDRP35968 1356 aa20.29■□□□□ 0.84
CCDC148-206ENST00000451554 MMP10P09238 476 aa20.28■□□□□ 0.84
CCDC148-206ENST00000451554 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
CCDC148-206ENST00000451554 ATG3Q9NT62 314 aa20.27■□□□□ 0.84
CCDC148-206ENST00000451554 MYH14Q7Z406 1995 aaKnown RBP20.27■□□□□ 0.84
CCDC148-206ENST00000451554 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
CCDC148-206ENST00000451554 ARFGEF1Q9Y6D6 1849 aa20.25■□□□□ 0.83
CCDC148-206ENST00000451554 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
CCDC148-206ENST00000451554 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
CCDC148-206ENST00000451554 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
CCDC148-206ENST00000451554 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
CCDC148-206ENST00000451554 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
CCDC148-206ENST00000451554 TGFB2P61812 414 aa20.21■□□□□ 0.83
CCDC148-206ENST00000451554 EIF4A2Q14240 407 aaKnown RBP20.21■□□□□ 0.83
CCDC148-206ENST00000451554 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
CCDC148-206ENST00000451554 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
CCDC148-206ENST00000451554 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
CCDC148-206ENST00000451554 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
CCDC148-206ENST00000451554 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
CCDC148-206ENST00000451554 NLGN1Q8N2Q7 840 aa20.19■□□□□ 0.82
CCDC148-206ENST00000451554 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
CCDC148-206ENST00000451554 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
CCDC148-206ENST00000451554 TJP1Q07157 1748 aa20.18■□□□□ 0.82
CCDC148-206ENST00000451554 ERVV-2B6SEH9 535 aa20.18■□□□□ 0.82
CCDC148-206ENST00000451554 GYS1P13807 737 aa20.18■□□□□ 0.82
CCDC148-206ENST00000451554 DPEP1P16444 411 aa20.18■□□□□ 0.82
CCDC148-206ENST00000451554 APLP1P51693 650 aa20.18■□□□□ 0.82
CCDC148-206ENST00000451554 RBM42Q9BTD8 480 aaKnown RBP20.18■□□□□ 0.82
CCDC148-206ENST00000451554 TOMM70O94826 608 aa20.17■□□□□ 0.82
CCDC148-206ENST00000451554 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
CCDC148-206ENST00000451554 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
CCDC148-206ENST00000451554 ARHGAP27Q6ZUM4 889 aa20.16■□□□□ 0.82
CCDC148-206ENST00000451554 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
CCDC148-206ENST00000451554 CCDC87Q9NVE4 849 aa20.16■□□□□ 0.82
CCDC148-206ENST00000451554 SBF1O95248 1867 aa20.15■□□□□ 0.82
CCDC148-206ENST00000451554 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
CCDC148-206ENST00000451554 ADAMTS7Q9UKP4 1686 aa20.15■□□□□ 0.82
CCDC148-206ENST00000451554 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.82
CCDC148-206ENST00000451554 RPS6KA4O75676 772 aa20.14■□□□□ 0.81
CCDC148-206ENST00000451554 FCHSD2O94868 740 aa20.14■□□□□ 0.81
CCDC148-206ENST00000451554 RFC4P35249 363 aa20.14■□□□□ 0.81
CCDC148-206ENST00000451554 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
CCDC148-206ENST00000451554 KCNA3P22001 575 aa20.13■□□□□ 0.81
CCDC148-206ENST00000451554 DNAJC5GQ8N7S2 189 aa20.13■□□□□ 0.81
CCDC148-206ENST00000451554 PARP3Q9Y6F1 533 aa20.13■□□□□ 0.81
CCDC148-206ENST00000451554 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
CCDC148-206ENST00000451554 PCNTO95613 3336 aa20.12■□□□□ 0.81
CCDC148-206ENST00000451554 ZNF530Q6P9A1 599 aaPredicted RBP20.11■□□□□ 0.81
CCDC148-206ENST00000451554 TNRC6CQ9HCJ0 1690 aaKnown RBP20.11■□□□□ 0.81
CCDC148-206ENST00000451554 CABP4P57796 275 aa20.11■□□□□ 0.81
CCDC148-206ENST00000451554 PLEKHO1Q53GL0 409 aaPredicted RBP20.11■□□□□ 0.81
CCDC148-206ENST00000451554 SLC4A2P04920 1241 aa20.1■□□□□ 0.81
CCDC148-206ENST00000451554 C9orf131Q5VYM1 1079 aa20.1■□□□□ 0.81
CCDC148-206ENST00000451554 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
CCDC148-206ENST00000451554 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
CCDC148-206ENST00000451554 PTCD1O75127 700 aaKnown RBP20.09■□□□□ 0.81
CCDC148-206ENST00000451554 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
CCDC148-206ENST00000451554 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
CCDC148-206ENST00000451554 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
CCDC148-206ENST00000451554 DDR1Q08345 913 aa20.08■□□□□ 0.81
CCDC148-206ENST00000451554 AMOTQ4VCS5 1084 aa20.08■□□□□ 0.81
CCDC148-206ENST00000451554 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.81
CCDC148-206ENST00000451554 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.8
CCDC148-206ENST00000451554 FKBP8Q14318 412 aa20.07■□□□□ 0.8
CCDC148-206ENST00000451554 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
CCDC148-206ENST00000451554 PIM2Q9P1W9 311 aa20.07■□□□□ 0.8
CCDC148-206ENST00000451554 MTHFSP49914 203 aa20.06■□□□□ 0.8
CCDC148-206ENST00000451554 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
CCDC148-206ENST00000451554 DALRD3Q5D0E6 543 aaKnown RBP20.05■□□□□ 0.8
CCDC148-206ENST00000451554 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
CCDC148-206ENST00000451554 NRXN2Q9P2S2 1712 aa20.04■□□□□ 0.8
CCDC148-206ENST00000451554 HTRA3P83110 453 aa20.04■□□□□ 0.8
CCDC148-206ENST00000451554 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
CCDC148-206ENST00000451554 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
CCDC148-206ENST00000451554 CHRNA5P30532 468 aa20.03■□□□□ 0.8
CCDC148-206ENST00000451554 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
CCDC148-206ENST00000451554 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
CCDC148-206ENST00000451554 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
CCDC148-206ENST00000451554 POLRMTO00411 1230 aaKnown RBP20.02■□□□□ 0.8
CCDC148-206ENST00000451554 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
CCDC148-206ENST00000451554 PANK3Q9H999 370 aa20.02■□□□□ 0.8
CCDC148-206ENST00000451554 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms