RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
USP39-207ENST00000450066 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
USP39-207ENST00000450066 IL2RBP14784 551 aa18.15■□□□□ 0.5
USP39-207ENST00000450066 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
USP39-207ENST00000450066 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
USP39-207ENST00000450066 DCAF5Q96JK2 942 aa18.15■□□□□ 0.5
USP39-207ENST00000450066 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
USP39-207ENST00000450066 ABCC4O15439 1325 aa18.15■□□□□ 0.5
USP39-207ENST00000450066 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.5
USP39-207ENST00000450066 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.5
USP39-207ENST00000450066 PTPRCP08575 1304 aa18.14■□□□□ 0.49
USP39-207ENST00000450066 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
USP39-207ENST00000450066 HOXB7P09629 217 aa18.14■□□□□ 0.49
USP39-207ENST00000450066 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
USP39-207ENST00000450066 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
USP39-207ENST00000450066 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
USP39-207ENST00000450066 CHMP4AQ9BY43 222 aa18.13■□□□□ 0.49
USP39-207ENST00000450066 SLC52A2Q9HAB3 445 aa18.13■□□□□ 0.49
USP39-207ENST00000450066 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
USP39-207ENST00000450066 MRC1P22897 1456 aa18.11■□□□□ 0.49
USP39-207ENST00000450066 KCNQ3O43525 872 aa18.11■□□□□ 0.49
USP39-207ENST00000450066 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
USP39-207ENST00000450066 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
USP39-207ENST00000450066 PCDHB15Q9Y5E8 787 aa18.1■□□□□ 0.49
USP39-207ENST00000450066 RGS12O14924 1447 aa18.1■□□□□ 0.49
USP39-207ENST00000450066 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
USP39-207ENST00000450066 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
USP39-207ENST00000450066 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
USP39-207ENST00000450066 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.49
USP39-207ENST00000450066 CERKQ8TCT0 537 aa18.08■□□□□ 0.49
USP39-207ENST00000450066 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
USP39-207ENST00000450066 IGHDP01880 384 aa18.08■□□□□ 0.48
USP39-207ENST00000450066 INTS3Q68E01 1043 aaKnown RBP18.08■□□□□ 0.48
USP39-207ENST00000450066 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
USP39-207ENST00000450066 CACNA1FO60840 1977 aa18.08■□□□□ 0.48
USP39-207ENST00000450066 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
USP39-207ENST00000450066 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
USP39-207ENST00000450066 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
USP39-207ENST00000450066 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
USP39-207ENST00000450066 G2E3Q7L622 706 aa18.07■□□□□ 0.48
USP39-207ENST00000450066 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
USP39-207ENST00000450066 SHANK3Q9BYB0 1731 aa18.06■□□□□ 0.48
USP39-207ENST00000450066 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
USP39-207ENST00000450066 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
USP39-207ENST00000450066 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
USP39-207ENST00000450066 CABP4P57796 275 aa18.05■□□□□ 0.48
USP39-207ENST00000450066 FLIIQ13045 1269 aa18.05■□□□□ 0.48
USP39-207ENST00000450066 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
USP39-207ENST00000450066 RWDD1Q9H446 243 aaPredicted RBP18.05■□□□□ 0.48
USP39-207ENST00000450066 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
USP39-207ENST00000450066 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
USP39-207ENST00000450066 JCADQ9P266 1359 aa18.04■□□□□ 0.48
USP39-207ENST00000450066 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
USP39-207ENST00000450066 DDX54Q8TDD1 881 aaKnown RBP18.04■□□□□ 0.48
USP39-207ENST00000450066 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
USP39-207ENST00000450066 SLC39A6Q13433 755 aa18.03■□□□□ 0.48
USP39-207ENST00000450066 HDAC1Q13547 482 aaPredicted RBP18.03■□□□□ 0.48
USP39-207ENST00000450066 NWD2Q9ULI1 1742 aa18.02■□□□□ 0.47
USP39-207ENST00000450066 SLIT2O94813 1529 aa18.02■□□□□ 0.47
USP39-207ENST00000450066 FKBP5Q13451 457 aaPredicted RBP18.02■□□□□ 0.47
USP39-207ENST00000450066 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.47
USP39-207ENST00000450066 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.47
USP39-207ENST00000450066 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
USP39-207ENST00000450066 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
USP39-207ENST00000450066 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
USP39-207ENST00000450066 SPATA31A1Q5TZJ5 1347 aa18■□□□□ 0.47
USP39-207ENST00000450066 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
USP39-207ENST00000450066 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
USP39-207ENST00000450066 F6X3S4 739 aa17.99■□□□□ 0.47
USP39-207ENST00000450066 FMNL2Q96PY5 1086 aa17.99■□□□□ 0.47
USP39-207ENST00000450066 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
USP39-207ENST00000450066 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
USP39-207ENST00000450066 WNK3Q9BYP7 1800 aa17.98■□□□□ 0.47
USP39-207ENST00000450066 PXDNLA1KZ92 1463 aa17.98■□□□□ 0.47
USP39-207ENST00000450066 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
USP39-207ENST00000450066 EXOC5O00471 708 aa17.97■□□□□ 0.47
USP39-207ENST00000450066 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
USP39-207ENST00000450066 SPATA31A5Q5VU36 1347 aa17.97■□□□□ 0.47
USP39-207ENST00000450066 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
USP39-207ENST00000450066 SPATA31A7Q8IWB4 1347 aa17.97■□□□□ 0.47
USP39-207ENST00000450066 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
USP39-207ENST00000450066 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP39-207ENST00000450066 C5P01031 1676 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
USP39-207ENST00000450066 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
USP39-207ENST00000450066 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 PDIA6Q15084 440 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
USP39-207ENST00000450066 GLI3P10071 1580 aa17.93■□□□□ 0.46
USP39-207ENST00000450066 ANXA1P04083 346 aa17.93■□□□□ 0.46
USP39-207ENST00000450066 C8orf37Q96NL8 207 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1669.9 ms