RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 TRIM27P14373 513 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 EIF4A1P60842 406 aaKnown RBP15.41■□□□□ 0.06
KDM1B-202ENST00000449850 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 SPATA31A1Q5TZJ5 1347 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 NFATC2IPQ8NCF5 419 aa15.41■□□□□ 0.06
KDM1B-202ENST00000449850 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
KDM1B-202ENST00000449850 NKX1-1Q15270 411 aaPredicted RBP15.4■□□□□ 0.06
KDM1B-202ENST00000449850 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 DDX54Q8TDD1 881 aaKnown RBP15.4■□□□□ 0.06
KDM1B-202ENST00000449850 C8orf37Q96NL8 207 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
KDM1B-202ENST00000449850 SHANK3Q9BYB0 1731 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 MRC1P22897 1456 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 KDM3BQ7LBC6 1761 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 SCN11AQ9UI33 1791 aa15.4■□□□□ 0.06
KDM1B-202ENST00000449850 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
KDM1B-202ENST00000449850 COG6Q9Y2V7 657 aa15.39■□□□□ 0.05
KDM1B-202ENST00000449850 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
KDM1B-202ENST00000449850 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
KDM1B-202ENST00000449850 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
KDM1B-202ENST00000449850 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
KDM1B-202ENST00000449850 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
KDM1B-202ENST00000449850 FNBP4Q8N3X1 1017 aaPredicted RBP15.38■□□□□ 0.05
KDM1B-202ENST00000449850 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
KDM1B-202ENST00000449850 NWD2Q9ULI1 1742 aa15.38■□□□□ 0.05
KDM1B-202ENST00000449850 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
KDM1B-202ENST00000449850 HEG1Q9ULI3 1381 aa15.37■□□□□ 0.05
KDM1B-202ENST00000449850 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
KDM1B-202ENST00000449850 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
KDM1B-202ENST00000449850 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
KDM1B-202ENST00000449850 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
KDM1B-202ENST00000449850 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
KDM1B-202ENST00000449850 ARHGAP45Q92619 1136 aa15.36■□□□□ 0.05
KDM1B-202ENST00000449850 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
KDM1B-202ENST00000449850 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
KDM1B-202ENST00000449850 CABP4P57796 275 aa15.35■□□□□ 0.05
KDM1B-202ENST00000449850 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
KDM1B-202ENST00000449850 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
KDM1B-202ENST00000449850 HOXB7P09629 217 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
KDM1B-202ENST00000449850 EXOC5O00471 708 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
KDM1B-202ENST00000449850 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
KDM1B-202ENST00000449850 TNS2Q63HR2 1409 aa15.33■□□□□ 0.05
KDM1B-202ENST00000449850 MS4A1P11836 297 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 VPS72Q15906 364 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 HDGFL1Q5TGJ6 251 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 G2E3Q7L622 706 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 RGS12O14924 1447 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.04
KDM1B-202ENST00000449850 CDCA7Q9BWT1 371 aaPredicted RBP15.33■□□□□ 0.04
KDM1B-202ENST00000449850 ABCC4O15439 1325 aa15.32■□□□□ 0.04
KDM1B-202ENST00000449850 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
KDM1B-202ENST00000449850 ZNF496Q96IT1 587 aaPredicted RBP15.32■□□□□ 0.04
KDM1B-202ENST00000449850 USP21Q9UK80 565 aa15.32■□□□□ 0.04
KDM1B-202ENST00000449850 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
KDM1B-202ENST00000449850 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
KDM1B-202ENST00000449850 ITPRIPQ8IWB1 547 aa15.31■□□□□ 0.04
KDM1B-202ENST00000449850 DDB1Q16531 1140 aa15.3■□□□□ 0.04
KDM1B-202ENST00000449850 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
KDM1B-202ENST00000449850 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
KDM1B-202ENST00000449850 PTPRCP08575 1304 aa15.3■□□□□ 0.04
KDM1B-202ENST00000449850 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
KDM1B-202ENST00000449850 CHPF2Q9P2E5 772 aa15.29■□□□□ 0.04
KDM1B-202ENST00000449850 FLIIQ13045 1269 aa15.29■□□□□ 0.04
KDM1B-202ENST00000449850 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
KDM1B-202ENST00000449850 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
KDM1B-202ENST00000449850 PIGBQ92521 554 aa15.28■□□□□ 0.04
KDM1B-202ENST00000449850 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
KDM1B-202ENST00000449850 DDX19BQ9UMR2 479 aa15.28■□□□□ 0.04
KDM1B-202ENST00000449850 AFF2P51816 1311 aa15.28■□□□□ 0.04
KDM1B-202ENST00000449850 GLI3P10071 1580 aa15.28■□□□□ 0.04
KDM1B-202ENST00000449850 FMNL2Q96PY5 1086 aa15.27■□□□□ 0.04
KDM1B-202ENST00000449850 ANXA1P04083 346 aa15.27■□□□□ 0.03
KDM1B-202ENST00000449850 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.03
KDM1B-202ENST00000449850 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
KDM1B-202ENST00000449850 F6X3S4 739 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 AAMPQ13685 434 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
KDM1B-202ENST00000449850 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
KDM1B-202ENST00000449850 PDIA6Q15084 440 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 INTS3Q68E01 1043 aaKnown RBP15.26■□□□□ 0.03
KDM1B-202ENST00000449850 DBF4Q9UBU7 674 aaPredicted RBP15.26■□□□□ 0.03
KDM1B-202ENST00000449850 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
KDM1B-202ENST00000449850 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
KDM1B-202ENST00000449850 BCL9O00512 1426 aa15.25■□□□□ 0.03
KDM1B-202ENST00000449850 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms