RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 ZHX3Q9H4I2 956 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 GNAI3P08754 354 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 VPS36Q86VN1 386 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 NUTM2DQ5VT03 806 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 TTC14Q96N46 770 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 MICALL1Q8N3F8 863 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 UBE4AQ14139 1066 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
SHANK2-211ENST00000449833 CCDC57Q2TAC2 916 aa13.46□□□□□ -0.25
SHANK2-211ENST00000449833 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
SHANK2-211ENST00000449833 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-211ENST00000449833 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.25
SHANK2-211ENST00000449833 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-211ENST00000449833 MAP3K7CLP57077 242 aa13.46□□□□□ -0.25
SHANK2-211ENST00000449833 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
SHANK2-211ENST00000449833 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.25
SHANK2-211ENST00000449833 HOOK3Q86VS8 718 aa13.46□□□□□ -0.26
SHANK2-211ENST00000449833 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.26
SHANK2-211ENST00000449833 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.26
SHANK2-211ENST00000449833 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.26
SHANK2-211ENST00000449833 PPFIA2O75334 1257 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 ATP11AP98196 1134 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 SPATS2LQ9NUQ6 558 aaKnown RBP13.45□□□□□ -0.26
SHANK2-211ENST00000449833 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 MAP7Q14244 749 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 OGFRQ9NZT2 677 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 CUX1P39880 1505 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-211ENST00000449833 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
SHANK2-211ENST00000449833 SYCE3A1L190 88 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
SHANK2-211ENST00000449833 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
SHANK2-211ENST00000449833 MPNDQ8N594 471 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 GBP7Q8N8V2 638 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-211ENST00000449833 IFT74Q96LB3 600 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 MCM4P33991 863 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 CCDC183Q5T5S1 534 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 VCX3BQ9H321 246 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 MYH10P35580 1976 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 HSF2BPO75031 334 aa13.44□□□□□ -0.26
SHANK2-211ENST00000449833 LACTBP83111 547 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-211ENST00000449833 GNAI2P04899 355 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 GBP1P32455 592 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
SHANK2-211ENST00000449833 WASF1Q92558 559 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 ZC4H2Q9NQZ6 224 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 OPA1O60313 960 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
SHANK2-211ENST00000449833 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 RNF8O76064 485 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 MATR3P43243 847 aaKnown RBP eCLIP13.43□□□□□ -0.263e-9■■■□□ 18.4
SHANK2-211ENST00000449833 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 FGFR1OPO95684 399 aaKnown RBP13.43□□□□□ -0.26
SHANK2-211ENST00000449833 STK3Q13188 491 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHANK2-211ENST00000449833 CCDC110Q8TBZ0 833 aa13.43□□□□□ -0.26
SHANK2-211ENST00000449833 KIF4BQ2VIQ3 1234 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 RSPH14Q9UHP6 348 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
SHANK2-211ENST00000449833 CAPN2P17655 700 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 RPAINQ86UA6 219 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 FAM114A2Q9NRY5 505 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 USO1O60763 962 aaKnown RBP13.42□□□□□ -0.26
SHANK2-211ENST00000449833 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 LUC7L3O95232 432 aaKnown RBP13.42□□□□□ -0.26
SHANK2-211ENST00000449833 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.264e-9■■■■■ 39.3
SHANK2-211ENST00000449833 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-211ENST00000449833 ALS2CR12Q96Q35 445 aa13.42□□□□□ -0.26
SHANK2-211ENST00000449833 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 FERP16591 822 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 PDCD7Q8N8D1 485 aaKnown RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 CEP104O60308 925 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 URI1O94763 535 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 ARHGAP25P42331 645 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 TOP1P11387 765 aaKnown RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 ANO10Q9NW15 660 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 PSME1Q06323 249 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-211ENST00000449833 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
SHANK2-211ENST00000449833 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
SHANK2-211ENST00000449833 KRT32Q14532 448 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms