RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
NUP85-202ENST00000449421 THRAP3Q9Y2W1 955 aaKnown RBP16.03■□□□□ 0.16
NUP85-202ENST00000449421 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
NUP85-202ENST00000449421 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
NUP85-202ENST00000449421 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.16
NUP85-202ENST00000449421 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
NUP85-202ENST00000449421 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.16
NUP85-202ENST00000449421 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
NUP85-202ENST00000449421 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.15
NUP85-202ENST00000449421 GLI3P10071 1580 aa16.01■□□□□ 0.15
NUP85-202ENST00000449421 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
NUP85-202ENST00000449421 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
NUP85-202ENST00000449421 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
NUP85-202ENST00000449421 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
NUP85-202ENST00000449421 BARGINQ6ZT62 677 aa16■□□□□ 0.15
NUP85-202ENST00000449421 MCM10Q7L590 875 aa16■□□□□ 0.15
NUP85-202ENST00000449421 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
NUP85-202ENST00000449421 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
NUP85-202ENST00000449421 MAP3K5Q99683 1374 aa16■□□□□ 0.15
NUP85-202ENST00000449421 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
NUP85-202ENST00000449421 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
NUP85-202ENST00000449421 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
NUP85-202ENST00000449421 TRIM27P14373 513 aa15.98■□□□□ 0.15
NUP85-202ENST00000449421 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
NUP85-202ENST00000449421 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
NUP85-202ENST00000449421 RBM19Q9Y4C8 960 aaKnown RBP15.98■□□□□ 0.15
NUP85-202ENST00000449421 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
NUP85-202ENST00000449421 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
NUP85-202ENST00000449421 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
NUP85-202ENST00000449421 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
NUP85-202ENST00000449421 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
NUP85-202ENST00000449421 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
NUP85-202ENST00000449421 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
NUP85-202ENST00000449421 PKD1L3Q7Z443 1732 aa15.96■□□□□ 0.15
NUP85-202ENST00000449421 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
NUP85-202ENST00000449421 RLBP1P12271 317 aa15.95■□□□□ 0.14
NUP85-202ENST00000449421 IL2RBP14784 551 aa15.95■□□□□ 0.14
NUP85-202ENST00000449421 RBM6P78332 1123 aaKnown RBP15.95■□□□□ 0.14
NUP85-202ENST00000449421 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
NUP85-202ENST00000449421 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
NUP85-202ENST00000449421 ITPRIPQ8IWB1 547 aa15.95■□□□□ 0.14
NUP85-202ENST00000449421 CCDC9Q9Y3X0 531 aaKnown RBP15.95■□□□□ 0.14
NUP85-202ENST00000449421 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
NUP85-202ENST00000449421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.141e-7■□□□□ 10.5
NUP85-202ENST00000449421 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
NUP85-202ENST00000449421 MEGF6O75095 1541 aa15.94■□□□□ 0.14
NUP85-202ENST00000449421 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
NUP85-202ENST00000449421 PTPRCP08575 1304 aa15.94■□□□□ 0.14
NUP85-202ENST00000449421 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
NUP85-202ENST00000449421 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
NUP85-202ENST00000449421 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
NUP85-202ENST00000449421 RXRBP28702 533 aa15.92■□□□□ 0.14
NUP85-202ENST00000449421 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
NUP85-202ENST00000449421 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
NUP85-202ENST00000449421 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
NUP85-202ENST00000449421 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
NUP85-202ENST00000449421 CCDC30Q5VVM6 783 aa15.91■□□□□ 0.14
NUP85-202ENST00000449421 ZNF530Q6P9A1 599 aaPredicted RBP15.91■□□□□ 0.14
NUP85-202ENST00000449421 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
NUP85-202ENST00000449421 TEFQ10587 303 aa15.9■□□□□ 0.14
NUP85-202ENST00000449421 SPG7Q9UQ90 795 aa15.9■□□□□ 0.14
NUP85-202ENST00000449421 TNNQ9UQP3 1299 aa15.9■□□□□ 0.14
NUP85-202ENST00000449421 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 IGHDP01880 384 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 HOXB7P09629 217 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 HDAC1Q13547 482 aaPredicted RBP15.89■□□□□ 0.13
NUP85-202ENST00000449421 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 ABCC4O15439 1325 aa15.89■□□□□ 0.13
NUP85-202ENST00000449421 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
NUP85-202ENST00000449421 EXOC5O00471 708 aa15.88■□□□□ 0.13
NUP85-202ENST00000449421 ZCRB1Q8TBF4 217 aaKnown RBP15.88■□□□□ 0.13
NUP85-202ENST00000449421 PCDHB15Q9Y5E8 787 aa15.88■□□□□ 0.13
NUP85-202ENST00000449421 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
NUP85-202ENST00000449421 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
NUP85-202ENST00000449421 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
NUP85-202ENST00000449421 DDB1Q16531 1140 aa15.86■□□□□ 0.13
NUP85-202ENST00000449421 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
NUP85-202ENST00000449421 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
NUP85-202ENST00000449421 RNMTO43148 476 aaKnown RBP15.85■□□□□ 0.13
NUP85-202ENST00000449421 ADAMTS7Q9UKP4 1686 aa15.85■□□□□ 0.13
NUP85-202ENST00000449421 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
NUP85-202ENST00000449421 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 CYP27B1O15528 508 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 PDE4AP27815 886 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
NUP85-202ENST00000449421 PCDH11XQ9BZA7 1347 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 PCDH11YQ9BZA8 1340 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 RGS12O14924 1447 aa15.84■□□□□ 0.13
NUP85-202ENST00000449421 CCT4P50991 539 aaKnown RBP15.83■□□□□ 0.12
NUP85-202ENST00000449421 IFNL2Q8IZJ0 200 aa15.83■□□□□ 0.12
NUP85-202ENST00000449421 BACH2Q9BYV9 841 aa15.83■□□□□ 0.12
NUP85-202ENST00000449421 BCL9O00512 1426 aa15.83■□□□□ 0.12
NUP85-202ENST00000449421 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
NUP85-202ENST00000449421 PHKG2P15735 406 aa15.82■□□□□ 0.12
NUP85-202ENST00000449421 KRT24Q2M2I5 525 aa15.82■□□□□ 0.12
NUP85-202ENST00000449421 MARCH10Q8NA82 808 aaPredicted RBP15.82■□□□□ 0.12
NUP85-202ENST00000449421 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
NUP85-202ENST00000449421 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
NUP85-202ENST00000449421 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms