RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
VIPAS39-203ENST00000448935 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-203ENST00000448935 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
VIPAS39-203ENST00000448935 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
VIPAS39-203ENST00000448935 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
VIPAS39-203ENST00000448935 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-203ENST00000448935 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 AKAP4Q5JQC9 854 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 ITPRIPQ8IWB1 547 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 TNNQ9UQP3 1299 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 ERBB3P21860 1342 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 CPDO75976 1380 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 COL18A1P39060 1754 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 ZC3H6P61129 1189 aaKnown RBP13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 OVOS2A0A0G2JMS6 1433 aa13.42□□□□□ -0.26
VIPAS39-203ENST00000448935 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
VIPAS39-203ENST00000448935 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
VIPAS39-203ENST00000448935 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
VIPAS39-203ENST00000448935 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
VIPAS39-203ENST00000448935 NHSL1Q5SYE7 1610 aa13.4□□□□□ -0.26
VIPAS39-203ENST00000448935 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
VIPAS39-203ENST00000448935 PTPRCP08575 1304 aa13.4□□□□□ -0.26
VIPAS39-203ENST00000448935 TMEM57Q8N5G2 664 aa13.4□□□□□ -0.26
VIPAS39-203ENST00000448935 ABCC4O15439 1325 aa13.39□□□□□ -0.27
VIPAS39-203ENST00000448935 ZNF530Q6P9A1 599 aaPredicted RBP13.39□□□□□ -0.27
VIPAS39-203ENST00000448935 IL17REQ8NFR9 667 aa13.39□□□□□ -0.27
VIPAS39-203ENST00000448935 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
VIPAS39-203ENST00000448935 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
VIPAS39-203ENST00000448935 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
VIPAS39-203ENST00000448935 IGHDP01880 384 aa13.38□□□□□ -0.27
VIPAS39-203ENST00000448935 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
VIPAS39-203ENST00000448935 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
VIPAS39-203ENST00000448935 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
VIPAS39-203ENST00000448935 TEFQ10587 303 aa13.37□□□□□ -0.27
VIPAS39-203ENST00000448935 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-203ENST00000448935 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
VIPAS39-203ENST00000448935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■■□ 24.3
VIPAS39-203ENST00000448935 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
VIPAS39-203ENST00000448935 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
VIPAS39-203ENST00000448935 TATP17735 454 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-203ENST00000448935 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
VIPAS39-203ENST00000448935 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
VIPAS39-203ENST00000448935 HOXB7P09629 217 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
VIPAS39-203ENST00000448935 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
VIPAS39-203ENST00000448935 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-203ENST00000448935 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-203ENST00000448935 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
VIPAS39-203ENST00000448935 PDE4AP27815 886 aa13.33□□□□□ -0.28
VIPAS39-203ENST00000448935 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-203ENST00000448935 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
VIPAS39-203ENST00000448935 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
VIPAS39-203ENST00000448935 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 BACH2Q9BYV9 841 aa13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-203ENST00000448935 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 RGS3P49796 1198 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
VIPAS39-203ENST00000448935 RGS12O14924 1447 aa13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 WDR17Q8IZU2 1322 aa13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-203ENST00000448935 TMEM132AQ24JP5 1023 aa13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 SMC5Q8IY18 1101 aa13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 AHDC1Q5TGY3 1603 aaPredicted RBP13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 MEGF6O75095 1541 aa13.29□□□□□ -0.28
VIPAS39-203ENST00000448935 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 COL5A2P05997 1499 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 PHKG2P15735 406 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms