RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 FLIIQ13045 1269 aa11.1□□□□□ -0.63
LINC00349-201ENST00000448748 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
LINC00349-201ENST00000448748 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
LINC00349-201ENST00000448748 CCDC18Q5T9S5 1454 aa11.09□□□□□ -0.63
LINC00349-201ENST00000448748 Q6ZVU0 165 aa11.09□□□□□ -0.63
LINC00349-201ENST00000448748 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
LINC00349-201ENST00000448748 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
LINC00349-201ENST00000448748 UPP2O95045 317 aa11.08□□□□□ -0.64
LINC00349-201ENST00000448748 BMP2P12643 396 aa11.08□□□□□ -0.64
LINC00349-201ENST00000448748 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
LINC00349-201ENST00000448748 NEO1Q92859 1461 aa11.07□□□□□ -0.64
LINC00349-201ENST00000448748 KIF14Q15058 1648 aa11.07□□□□□ -0.64
LINC00349-201ENST00000448748 LILRA1O75019 489 aa11.07□□□□□ -0.64
LINC00349-201ENST00000448748 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
LINC00349-201ENST00000448748 TSEN34Q9BSV6 310 aaKnown RBP11.07□□□□□ -0.64
LINC00349-201ENST00000448748 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00349-201ENST00000448748 CYLDQ9NQC7 956 aa11.06□□□□□ -0.64
LINC00349-201ENST00000448748 FRMPD1Q5SYB0 1578 aa11.06□□□□□ -0.64
LINC00349-201ENST00000448748 CFAP74Q9C0B2 1584 aa11.06□□□□□ -0.64
LINC00349-201ENST00000448748 ADD1P35611 737 aaKnown RBP11.05□□□□□ -0.64
LINC00349-201ENST00000448748 TROQ12816 1431 aaPredicted RBP11.05□□□□□ -0.64
LINC00349-201ENST00000448748 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
LINC00349-201ENST00000448748 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
LINC00349-201ENST00000448748 MYO5CQ9NQX4 1742 aa11.05□□□□□ -0.64
LINC00349-201ENST00000448748 CEP126Q9P2H0 1117 aa11.05□□□□□ -0.64
LINC00349-201ENST00000448748 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
LINC00349-201ENST00000448748 ARID3CA6NKF2 412 aa11.04□□□□□ -0.64
LINC00349-201ENST00000448748 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
LINC00349-201ENST00000448748 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
LINC00349-201ENST00000448748 SOBPA7XYQ1 873 aa11.03□□□□□ -0.64
LINC00349-201ENST00000448748 RELBQ01201 579 aa11.03□□□□□ -0.64
LINC00349-201ENST00000448748 RAD21O60216 631 aa11.02□□□□□ -0.65
LINC00349-201ENST00000448748 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
LINC00349-201ENST00000448748 PREX2Q70Z35 1606 aa11.02□□□□□ -0.65
LINC00349-201ENST00000448748 PLEKHD1A6NEE1 506 aa11.01□□□□□ -0.65
LINC00349-201ENST00000448748 ADH1AP07327 375 aa11.01□□□□□ -0.65
LINC00349-201ENST00000448748 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
LINC00349-201ENST00000448748 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
LINC00349-201ENST00000448748 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 SPINT1O43278 529 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 SCTRP47872 440 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 KDF1Q8NAX2 398 aaPredicted RBP11□□□□□ -0.65
LINC00349-201ENST00000448748 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
LINC00349-201ENST00000448748 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
LINC00349-201ENST00000448748 CDC42BPAQ5VT25 1732 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 PLCH2O75038 1416 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 FANCAO15360 1455 aa11□□□□□ -0.65
LINC00349-201ENST00000448748 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
LINC00349-201ENST00000448748 ZNF395Q9H8N7 513 aaPredicted RBP10.99□□□□□ -0.65
LINC00349-201ENST00000448748 MAN1A2O60476 641 aa10.98□□□□□ -0.65
LINC00349-201ENST00000448748 CC2D2BQ6DHV5 1058 aa10.98□□□□□ -0.65
LINC00349-201ENST00000448748 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
LINC00349-201ENST00000448748 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
LINC00349-201ENST00000448748 TSGA10IPQ3SY00 556 aa10.97□□□□□ -0.65
LINC00349-201ENST00000448748 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
LINC00349-201ENST00000448748 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
LINC00349-201ENST00000448748 INSM2Q96T92 566 aaPredicted RBP10.97□□□□□ -0.65
LINC00349-201ENST00000448748 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
LINC00349-201ENST00000448748 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
LINC00349-201ENST00000448748 ARHGEF40Q8TER5 1519 aa10.97□□□□□ -0.65
LINC00349-201ENST00000448748 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 EHBP1L1Q8N3D4 1523 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 TTLL8A6PVC2 850 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 SOX11P35716 441 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 PTGIRP43119 386 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 CTSOP43234 321 aaPredicted RBP10.96□□□□□ -0.65
LINC00349-201ENST00000448748 SEMA3FQ13275 785 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 SLFNL1Q499Z3 407 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 WWC1Q8IX03 1113 aa10.96□□□□□ -0.65
LINC00349-201ENST00000448748 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
LINC00349-201ENST00000448748 KDM5CP41229 1560 aa10.95□□□□□ -0.66
LINC00349-201ENST00000448748 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
LINC00349-201ENST00000448748 ABCC1P33527 1531 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 POGZQ7Z3K3 1410 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 TERTO14746 1132 aaKnown RBP10.94□□□□□ -0.66
LINC00349-201ENST00000448748 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
LINC00349-201ENST00000448748 RNF135Q8IUD6 432 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
LINC00349-201ENST00000448748 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
LINC00349-201ENST00000448748 ITSN2Q9NZM3 1697 aa10.93□□□□□ -0.66
LINC00349-201ENST00000448748 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
LINC00349-201ENST00000448748 TREML4Q6UXN2 200 aa10.93□□□□□ -0.66
LINC00349-201ENST00000448748 ALG2Q9H553 416 aa10.93□□□□□ -0.66
LINC00349-201ENST00000448748 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
LINC00349-201ENST00000448748 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
LINC00349-201ENST00000448748 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
LINC00349-201ENST00000448748 TRAK2O60296 914 aa10.92□□□□□ -0.66
LINC00349-201ENST00000448748 DOLKQ9UPQ8 538 aa10.92□□□□□ -0.66
LINC00349-201ENST00000448748 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
LINC00349-201ENST00000448748 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
LINC00349-201ENST00000448748 SIGLEC1Q9BZZ2 1709 aa10.92□□□□□ -0.66
LINC00349-201ENST00000448748 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
LINC00349-201ENST00000448748 ARHGAP5Q13017 1502 aa10.91□□□□□ -0.66
LINC00349-201ENST00000448748 VEGFBP49765 207 aa10.91□□□□□ -0.66
LINC00349-201ENST00000448748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
LINC00349-201ENST00000448748 LCE2AQ5TA79 106 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms