RNA–Protein interactions for RNA: ENST00000448465.1

LINC00476-206, long intergenic non-protein coding RNA 476, humanhuman

TSL 3

Gene LINC00476, Length 290 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-206ENST00000448465 TGFB2P61812 414 aa11.53□□□□□ -0.56
LINC00476-206ENST00000448465 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
LINC00476-206ENST00000448465 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
LINC00476-206ENST00000448465 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
LINC00476-206ENST00000448465 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.56
LINC00476-206ENST00000448465 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
LINC00476-206ENST00000448465 ITPK1Q13572 414 aa11.52□□□□□ -0.57
LINC00476-206ENST00000448465 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
LINC00476-206ENST00000448465 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
LINC00476-206ENST00000448465 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 CAPN15O75808 1086 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 FCHSD2O94868 740 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 KCNA4P22459 653 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 HTRA3P83110 453 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 TRAPPC3LQ5T215 181 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
LINC00476-206ENST00000448465 NLGN1Q8N2Q7 840 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
LINC00476-206ENST00000448465 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 KIF24Q5T7B8 1368 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
LINC00476-206ENST00000448465 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
LINC00476-206ENST00000448465 DPEP1P16444 411 aa11.5□□□□□ -0.57
LINC00476-206ENST00000448465 TMF1P82094 1093 aa11.5□□□□□ -0.57
LINC00476-206ENST00000448465 KLRG1Q96E93 195 aa11.5□□□□□ -0.57
LINC00476-206ENST00000448465 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
LINC00476-206ENST00000448465 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
LINC00476-206ENST00000448465 RTCBQ9Y3I0 505 aaKnown RBP11.5□□□□□ -0.57
LINC00476-206ENST00000448465 C9orf131Q5VYM1 1079 aa11.49□□□□□ -0.57
LINC00476-206ENST00000448465 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
LINC00476-206ENST00000448465 EMILIN1Q9Y6C2 1016 aa11.49□□□□□ -0.57
LINC00476-206ENST00000448465 C10orf71Q711Q0 1435 aa11.49□□□□□ -0.57
LINC00476-206ENST00000448465 FSTL1Q12841 308 aa11.48□□□□□ -0.57
LINC00476-206ENST00000448465 IFNL2Q8IZJ0 200 aa11.48□□□□□ -0.57
LINC00476-206ENST00000448465 JMYQ8N9B5 988 aa11.48□□□□□ -0.57
LINC00476-206ENST00000448465 PARP3Q9Y6F1 533 aa11.48□□□□□ -0.57
LINC00476-206ENST00000448465 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
LINC00476-206ENST00000448465 BRCA1P38398 1863 aaKnown RBP11.47□□□□□ -0.57
LINC00476-206ENST00000448465 PLEKHG2Q9H7P9 1386 aa11.47□□□□□ -0.57
LINC00476-206ENST00000448465 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
LINC00476-206ENST00000448465 PHKG2P15735 406 aa11.47□□□□□ -0.57
LINC00476-206ENST00000448465 RFC4P35249 363 aa11.47□□□□□ -0.57
LINC00476-206ENST00000448465 TNS4Q8IZW8 715 aa11.47□□□□□ -0.57
LINC00476-206ENST00000448465 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
LINC00476-206ENST00000448465 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
LINC00476-206ENST00000448465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00476-206ENST00000448465 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
LINC00476-206ENST00000448465 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
LINC00476-206ENST00000448465 GYS1P13807 737 aa11.46□□□□□ -0.57
LINC00476-206ENST00000448465 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
LINC00476-206ENST00000448465 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
LINC00476-206ENST00000448465 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.58
LINC00476-206ENST00000448465 KDRP35968 1356 aa11.45□□□□□ -0.58
LINC00476-206ENST00000448465 KCNA3P22001 575 aa11.45□□□□□ -0.58
LINC00476-206ENST00000448465 DALRD3Q5D0E6 543 aaKnown RBP11.45□□□□□ -0.58
LINC00476-206ENST00000448465 EYA1Q99502 592 aa11.45□□□□□ -0.58
LINC00476-206ENST00000448465 RNF181Q9P0P0 153 aa11.45□□□□□ -0.58
LINC00476-206ENST00000448465 WASHC2AQ641Q2 1341 aa11.44□□□□□ -0.58
LINC00476-206ENST00000448465 RPS6KA4O75676 772 aa11.44□□□□□ -0.58
LINC00476-206ENST00000448465 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
LINC00476-206ENST00000448465 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
LINC00476-206ENST00000448465 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
LINC00476-206ENST00000448465 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 PRELPP51888 382 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
LINC00476-206ENST00000448465 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 DCAF5Q96JK2 942 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 ANKRD26Q9UPS8 1709 aa11.43□□□□□ -0.58
LINC00476-206ENST00000448465 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
LINC00476-206ENST00000448465 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
LINC00476-206ENST00000448465 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
LINC00476-206ENST00000448465 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
LINC00476-206ENST00000448465 CHRNA5P30532 468 aa11.41□□□□□ -0.58
LINC00476-206ENST00000448465 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
LINC00476-206ENST00000448465 CABP4P57796 275 aa11.4□□□□□ -0.58
LINC00476-206ENST00000448465 FKBP8Q14318 412 aa11.4□□□□□ -0.58
LINC00476-206ENST00000448465 SRP68Q9UHB9 627 aaKnown RBP11.4□□□□□ -0.58
LINC00476-206ENST00000448465 SBF1O95248 1867 aa11.4□□□□□ -0.59
LINC00476-206ENST00000448465 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
LINC00476-206ENST00000448465 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
LINC00476-206ENST00000448465 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
LINC00476-206ENST00000448465 DDR1Q08345 913 aa11.39□□□□□ -0.59
LINC00476-206ENST00000448465 EIF4A2Q14240 407 aaKnown RBP11.39□□□□□ -0.59
LINC00476-206ENST00000448465 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
LINC00476-206ENST00000448465 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
LINC00476-206ENST00000448465 USP42Q9H9J4 1324 aaKnown RBP11.38□□□□□ -0.59
LINC00476-206ENST00000448465 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
LINC00476-206ENST00000448465 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
LINC00476-206ENST00000448465 RASSF7Q02833 373 aa11.38□□□□□ -0.59
LINC00476-206ENST00000448465 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
LINC00476-206ENST00000448465 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
LINC00476-206ENST00000448465 ZC3H4Q9UPT8 1303 aaKnown RBP11.36□□□□□ -0.59
LINC00476-206ENST00000448465 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
LINC00476-206ENST00000448465 GLTPD2A6NH11 291 aa11.36□□□□□ -0.59
LINC00476-206ENST00000448465 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
LINC00476-206ENST00000448465 MTHFSP49914 203 aa11.36□□□□□ -0.59
LINC00476-206ENST00000448465 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
LINC00476-206ENST00000448465 ZPR1O75312 459 aa11.35□□□□□ -0.59
LINC00476-206ENST00000448465 LMNB1P20700 586 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms