RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 A0A0G2JLW4 131 aa10.02□□□□□ -0.81
LRRC28-203ENST00000447360 NLGN1Q8N2Q7 840 aa10.02□□□□□ -0.81
LRRC28-203ENST00000447360 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
LRRC28-203ENST00000447360 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.81
LRRC28-203ENST00000447360 GNPATO15228 680 aa10.01□□□□□ -0.81
LRRC28-203ENST00000447360 FCHSD2O94868 740 aa10.01□□□□□ -0.81
LRRC28-203ENST00000447360 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
LRRC28-203ENST00000447360 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-203ENST00000447360 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
LRRC28-203ENST00000447360 CARD11Q9BXL7 1154 aa10.01□□□□□ -0.81
LRRC28-203ENST00000447360 C10orf71Q711Q0 1435 aa10□□□□□ -0.81
LRRC28-203ENST00000447360 WDR90Q96KV7 1748 aa10□□□□□ -0.81
LRRC28-203ENST00000447360 TMF1P82094 1093 aa10□□□□□ -0.81
LRRC28-203ENST00000447360 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
LRRC28-203ENST00000447360 INSRP06213 1382 aa10□□□□□ -0.81
LRRC28-203ENST00000447360 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 TAF1LQ8IZX4 1826 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 DPEP1P16444 411 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 ATP6V1AP38606 617 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 ITPK1Q13572 414 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 KIF24Q5T7B8 1368 aa9.99□□□□□ -0.81
LRRC28-203ENST00000447360 UBR3Q6ZT12 1888 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 KCNA3P22001 575 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 HSP90AB2PQ58FF8 381 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 RRAGCQ9HB90 399 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 PIM2Q9P1W9 311 aa9.98□□□□□ -0.81
LRRC28-203ENST00000447360 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
LRRC28-203ENST00000447360 FYB1O15117 783 aa9.97□□□□□ -0.81
LRRC28-203ENST00000447360 HSPA1AP0DMV8 641 aaKnown RBP9.97□□□□□ -0.81
LRRC28-203ENST00000447360 HSPA1BP0DMV9 641 aaKnown RBP9.97□□□□□ -0.81
LRRC28-203ENST00000447360 DCAF5Q96JK2 942 aa9.97□□□□□ -0.81
LRRC28-203ENST00000447360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■■■□□ 18.9
LRRC28-203ENST00000447360 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
LRRC28-203ENST00000447360 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
LRRC28-203ENST00000447360 FLT4P35916 1363 aa9.97□□□□□ -0.81
LRRC28-203ENST00000447360 GYS1P13807 737 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 DALRD3Q5D0E6 543 aaKnown RBP9.96□□□□□ -0.82
LRRC28-203ENST00000447360 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
LRRC28-203ENST00000447360 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
LRRC28-203ENST00000447360 RNF181Q9P0P0 153 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 PARP3Q9Y6F1 533 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
LRRC28-203ENST00000447360 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.82
LRRC28-203ENST00000447360 RFC4P35249 363 aa9.95□□□□□ -0.82
LRRC28-203ENST00000447360 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
LRRC28-203ENST00000447360 ATG3Q9NT62 314 aa9.95□□□□□ -0.82
LRRC28-203ENST00000447360 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-203ENST00000447360 RGPD2P0DJD1 1756 aa9.95□□□□□ -0.82
LRRC28-203ENST00000447360 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
LRRC28-203ENST00000447360 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
LRRC28-203ENST00000447360 TESK2Q96S53 571 aa9.94□□□□□ -0.82
LRRC28-203ENST00000447360 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 RPS6KA4O75676 772 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 SLC34A2O95436 690 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-203ENST00000447360 PHKG2P15735 406 aa9.93□□□□□ -0.82
LRRC28-203ENST00000447360 KDRP35968 1356 aa9.92□□□□□ -0.82
LRRC28-203ENST00000447360 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
LRRC28-203ENST00000447360 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
LRRC28-203ENST00000447360 N4BP2Q86UW6 1770 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-203ENST00000447360 ST20-MTHFSA0A0A6YYL1 179 aa9.91□□□□□ -0.82
LRRC28-203ENST00000447360 GLTPD2A6NH11 291 aa9.91□□□□□ -0.82
LRRC28-203ENST00000447360 CACNB1Q02641 598 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-203ENST00000447360 ITGB4P16144 1822 aa9.91□□□□□ -0.82
LRRC28-203ENST00000447360 C4AP0C0L4 1744 aa9.9□□□□□ -0.82
LRRC28-203ENST00000447360 ERVV-2B6SEH9 535 aa9.9□□□□□ -0.82
LRRC28-203ENST00000447360 LMNB1P20700 586 aa9.9□□□□□ -0.82
LRRC28-203ENST00000447360 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
LRRC28-203ENST00000447360 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.83
LRRC28-203ENST00000447360 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-203ENST00000447360 WASHC2AQ641Q2 1341 aa9.89□□□□□ -0.83
LRRC28-203ENST00000447360 CHRNA5P30532 468 aa9.89□□□□□ -0.83
LRRC28-203ENST00000447360 EYA1Q99502 592 aa9.89□□□□□ -0.83
LRRC28-203ENST00000447360 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
LRRC28-203ENST00000447360 TNRC6CQ9HCJ0 1690 aaKnown RBP9.89□□□□□ -0.83
LRRC28-203ENST00000447360 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
LRRC28-203ENST00000447360 BRCA1P38398 1863 aaKnown RBP9.88□□□□□ -0.83
LRRC28-203ENST00000447360 HSP90AB1P08238 724 aaKnown RBP9.88□□□□□ -0.83
LRRC28-203ENST00000447360 DDR1Q08345 913 aa9.88□□□□□ -0.83
LRRC28-203ENST00000447360 PRDM10Q9NQV6 1147 aa9.88□□□□□ -0.83
LRRC28-203ENST00000447360 CREBZFQ9NS37 354 aa9.88□□□□□ -0.83
LRRC28-203ENST00000447360 ARFGEF1Q9Y6D6 1849 aa9.88□□□□□ -0.83
LRRC28-203ENST00000447360 POLRMTO00411 1230 aaKnown RBP9.87□□□□□ -0.83
LRRC28-203ENST00000447360 PPM1GO15355 546 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-203ENST00000447360 TM4SF1P30408 202 aa9.87□□□□□ -0.83
LRRC28-203ENST00000447360 RASSF7Q02833 373 aa9.87□□□□□ -0.83
LRRC28-203ENST00000447360 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
LRRC28-203ENST00000447360 POTECB2RU33 542 aa9.86□□□□□ -0.83
LRRC28-203ENST00000447360 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
LRRC28-203ENST00000447360 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
LRRC28-203ENST00000447360 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms