RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PRSS12P56730 875 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 PACS2Q86VP3 889 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 FAM198AQ9UFP1 575 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 SBF2Q86WG5 1849 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 CRYBG1Q9Y4K1 1723 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 WBP1LQ9NX94 342 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 COL24A1Q17RW2 1714 aa5.2□□□□□ -1.58
PMS1-215ENST00000447232 BARGINQ6ZT62 677 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 WDR90Q96KV7 1748 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 AATKQ6ZMQ8 1374 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 TECPR2O15040 1411 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 C3orf80F5H4A9 247 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 PSME1Q06323 249 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 PDE3BQ13370 1112 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 PCNTO95613 3336 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 NRXN1Q9ULB1 1477 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 ALS2Q96Q42 1657 aa5.19□□□□□ -1.58
PMS1-215ENST00000447232 TRPM3Q9HCF6 1732 aaPredicted RBP5.19□□□□□ -1.58
PMS1-215ENST00000447232 NUTM2FA1L443 756 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 C11orf95C9JLR9 678 aaPredicted RBP5.18□□□□□ -1.58
PMS1-215ENST00000447232 SLC15A2Q16348 729 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 ARHGEF1Q92888 912 aaKnown RBP5.18□□□□□ -1.58
PMS1-215ENST00000447232 CDHR5Q9HBB8 845 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 ANKRD50Q9ULJ7 1429 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 PARP4Q9UKK3 1724 aaKnown RBP5.18□□□□□ -1.58
PMS1-215ENST00000447232 SMAPO00193 183 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 GRIN3BO60391 1043 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 YBX3P16989 372 aaKnown RBP eCLIP5.18□□□□□ -1.58
PMS1-215ENST00000447232 KLRG1Q96E93 195 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 NPDC1Q9NQX5 325 aaPredicted RBP5.18□□□□□ -1.58
PMS1-215ENST00000447232 WWC3Q9ULE0 1092 aa5.18□□□□□ -1.58
PMS1-215ENST00000447232 RGPD8O14715 1765 aaPredicted RBP5.18□□□□□ -1.58
PMS1-215ENST00000447232 ITGBL1O95965 494 aaPredicted RBP5.17□□□□□ -1.58
PMS1-215ENST00000447232 NYAP1Q6ZVC0 841 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 KCNV2Q8TDN2 545 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.17□□□□□ -1.58
PMS1-215ENST00000447232 STK32BQ9NY57 414 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 OVOS2A0A0G2JMS6 1433 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 OVOS2A0A0J9YW53 1432 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 OVOS2Q6IE36 1432 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 ZNF326Q5BKZ1 582 aaKnown RBP5.17□□□□□ -1.58
PMS1-215ENST00000447232 LRCH3Q96II8 777 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 TSR3Q9UJK0 312 aaKnown RBP5.17□□□□□ -1.58
PMS1-215ENST00000447232 CHIC2Q9UKJ5 165 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 PAPPAQ13219 1627 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 TNS2Q63HR2 1409 aa5.17□□□□□ -1.58
PMS1-215ENST00000447232 PTF1AQ7RTS3 328 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 NLGN2Q8NFZ4 835 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 TATDN2Q93075 761 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 DHX57Q6P158 1386 aaKnown RBP5.16□□□□□ -1.58
PMS1-215ENST00000447232 MLLT3P42568 568 aaPredicted RBP5.16□□□□□ -1.58
PMS1-215ENST00000447232 LMOD2Q6P5Q4 547 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 HPS5Q9UPZ3 1129 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 ATP7BP35670 1465 aa5.16□□□□□ -1.58
PMS1-215ENST00000447232 TTC13Q8NBP0 860 aa5.15□□□□□ -1.58
PMS1-215ENST00000447232 ZNF526Q8TF50 670 aaPredicted RBP5.15□□□□□ -1.58
PMS1-215ENST00000447232 PRDM11Q9NQV5 511 aa5.15□□□□□ -1.58
PMS1-215ENST00000447232 RBM27Q9P2N5 1060 aaKnown RBP5.15□□□□□ -1.58
PMS1-215ENST00000447232 IFT172Q9UG01 1749 aa5.15□□□□□ -1.58
PMS1-215ENST00000447232 SSH2Q76I76 1423 aa5.15□□□□□ -1.58
PMS1-215ENST00000447232 TXNRD1Q16881 649 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 SAMD7Q7Z3H4 446 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 BCL9O00512 1426 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 CLTCL1P53675 1640 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 PLEKHH1Q9ULM0 1364 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 KNDC1Q76NI1 1749 aa5.15□□□□□ -1.59
PMS1-215ENST00000447232 ARHGEF28Q8N1W1 1705 aaKnown RBP5.15□□□□□ -1.59
PMS1-215ENST00000447232 KANK4Q5T7N3 995 aaPredicted RBP5.14□□□□□ -1.59
PMS1-215ENST00000447232 NUDT18Q6ZVK8 323 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 WAPLQ7Z5K2 1190 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 USP35Q9P2H5 1018 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 PNMA3Q9UL41 463 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 KIAA0232Q92628 1395 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 TOPAZ1Q8N9V7 1692 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 LRRC37A3O60309 1634 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 RGS20O76081 388 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 TOMM70O94826 608 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 TCP11L2Q8N4U5 519 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 STRN4Q9NRL3 753 aa5.14□□□□□ -1.59
PMS1-215ENST00000447232 NBPF26B4DH59 902 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 PPP4CP60510 307 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 QSER1Q2KHR3 1735 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 THRAP3Q9Y2W1 955 aaKnown RBP5.13□□□□□ -1.59
PMS1-215ENST00000447232 HTRA3P83110 453 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 LMO7Q8WWI1 1683 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 TULP4Q9NRJ4 1543 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 ABCC11Q96J66 1382 aa5.13□□□□□ -1.59
PMS1-215ENST00000447232 PHRF1Q9P1Y6 1649 aaKnown RBP5.13□□□□□ -1.59
PMS1-215ENST00000447232 KCNC4Q03721 635 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 CHRNA2Q15822 529 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 LARP1Q6PKG0 1096 aaKnown RBP5.12□□□□□ -1.59
PMS1-215ENST00000447232 PADI6Q6TGC4 694 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 KIF1BO60333 1816 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 HSPA1AP0DMV8 641 aaKnown RBP5.12□□□□□ -1.59
PMS1-215ENST00000447232 HSPA1BP0DMV9 641 aaKnown RBP5.12□□□□□ -1.59
PMS1-215ENST00000447232 FAM161AQ3B820 660 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 SLC16A10Q8TF71 515 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 PPLO60437 1756 aa5.12□□□□□ -1.59
PMS1-215ENST00000447232 POLD1P28340 1107 aa5.11□□□□□ -1.59
PMS1-215ENST00000447232 PTGDRQ13258 359 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms